Rivularia sp. PCC 7116: Riv7116_1982
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Entry
Riv7116_1982 CDS
T02364
Name
(GenBank) DNA-directed RNA polymerase, subunit K/omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Riv7116_1982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
riv03021
]
Riv7116_1982
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_1982
Enzymes [BR:
riv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Riv7116_1982
Transcription machinery [BR:
riv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Riv7116_1982
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Riv7116_1982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF961
Motif
Other DBs
NCBI-ProteinID:
AFY54520
UniProt:
K9R9C5
LinkDB
All DBs
Position
complement(2450172..2450408)
Genome browser
AA seq
78 aa
AA seq
DB search
MLRRSKFETTQSQIMHRAEDLISAASNRYRITVQVANRAKRRRYEDFDNTEDVLMKPVLR
SIIEMSDELTQPEIIGEM
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggcgttctaaattcgagacaactcaatctcaaatcatgcaccgtgccgaagat
ttaatcagtgcggcttccaaccgctatcggattacagttcaagtggcaaaccgcgctaaa
cgcaggcgttacgaagatttcgacaataccgaagatgtattgatgaagcctgtattacgc
tcgattattgaaatgtccgacgaattaacccagccagaaatcatcggcgaaatgtaa
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