Rivularia sp. PCC 7116: Riv7116_2825
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Entry
Riv7116_2825 CDS
T02364
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03420
Nucleotide excision repair
riv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Riv7116_2825
03430 Mismatch repair
Riv7116_2825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_2825
Enzymes [BR:
riv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Riv7116_2825
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Riv7116_2825
MMR (mismatch excision repair)
Other MMR factors
Riv7116_2825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
ResIII
CarD_TRCF_RID
Terminase_6N
CPSase_sm_chain
Motif
Other DBs
NCBI-ProteinID:
AFY55322
UniProt:
K9RE17
LinkDB
All DBs
Position
complement(3495505..3497865)
Genome browser
AA seq
786 aa
AA seq
DB search
MTTTTDSLSHLNPHQRRAVEHFCGPLLVVAGAGSGKTRALTYRIANLITEHKVNPENILA
VTFTNKAAREMKERIQKLFAEQMALSEYGERYDLLPEYDQVKLRSKVYKLVIKDLWCGTF
HSLLSRILRFDIEKYQDENGRAWKKNFSIFDESDAQSLVKEIVTKQLNLSDKKFNPRSVR
YTISNAKNQGLSPKDYEKEEPNYKGRVIAEVYNCYQDRLAANNALDFDDLILVPVRLFQQ
NEQVLGYWHNKFRHILVDEYQDTNRTQYQLISLLATYGEQKSHWKWQNRSVFVVGDADQS
IYSFRMADFTILLDFQQDFGDGLDDDDTRSMVKLEENYRSCENILQAANHLIENNTQRID
KVLKATRGEGEQIFYFKADDEVAEANFVINKIRSLEKENPDINWGNFSILYRTNAQSRPF
EDMLVRNGIPYTVVGGLKFYDRKEIKDVLGYLRAIANPADTVSLLRVINTPRRGIGKATI
ENLTNAAQELGVSLWEILSDETSVNTLGGRSAKSVNNFAKMIGRLQQEVENLPASEILQT
VLDESGYVQDLHKQGNDEAEDRIRNVGELYNAVRQYEEEAEQDASLAGFLASTALSSDLD
NVKEGQSAVSLMTLHSSKGLEFPVVFLVGLEQGLFPNYRSMNDPASLEEERRLCYVGITR
AQERLFLSHARERRLYGTREPAVRSQFLDELPRELLATQYPRSVTYTNTGGRTSASYNNG
FESTSSSKPTANVNWQVGDKVMHKSFGAGEITHIFGGGNKVSVAIKFPGLGQKIIDPRVA
QLQKME
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacaaccgactctctcagtcacctcaatccccatcaacgtcgcgctgtcgaa
catttttgcggcccattgctagttgttgctggcgcgggttctggtaaaacacgagcgctg
acttatcgcattgctaacttaattacagagcataaagtcaatccagaaaatatcttagcg
gttacttttactaataaagctgctcgggagatgaaggagcgtattcaaaagctattcgcc
gaacaaatggcactttctgaatatggcgaacgttacgatttgttaccggaatacgaccag
gtaaagttaaggtcgaaggtttacaagcttgttattaaggatttatggtgcggtactttc
cacagtttgctttctcggattcttcggtttgatatcgagaaatatcaagatgagaatgga
cgtgcttggaagaagaatttttcgatttttgatgaatctgacgctcaaagtttggttaag
gaaattgttaccaagcagttgaatctaagcgataaaaaatttaatcctcgttccgttcgc
tacaccatcagtaatgctaaaaatcagggattatcgccaaaggattatgagaaagaagaa
ccgaattataagggaagagtaattgcagaagtttacaattgctatcaagataggttagca
gcaaataatgctctggattttgacgatttgattttggttccagtcagattgtttcagcaa
aacgagcaggttttgggttactggcacaataaatttcgtcatatcttagtagatgaatat
caagatacaaaccgcactcaatatcaattgataagtttgctagcgacttatggagaacag
aaaagtcactggaagtggcaaaaccgttcggtattcgtagtaggcgatgcagaccaatct
atatattcttttagaatggctgacttcacaattttgttagactttcaacaagattttggt
gatggtttagatgatgacgatactcgttcgatggtgaaattagaagaaaactatcgttct
tgtgaaaatattctccaagctgcgaatcatttaattgaaaataacacccagcggattgat
aaggttcttaaagcaacgcggggtgaaggcgaacaaattttttattttaaagccgatgat
gaagtagcagaagctaattttgttatcaataaaattcgttctttggaaaaagaaaatccc
gatataaattggggaaatttttctattctttaccgtactaacgctcaatctcgtcccttt
gaggatatgttagtgagaaatggaattccctacactgtagttgggggattaaagttctat
gaccgtaaagaaattaaagatgtcttgggttatttaagggctattgccaaccctgccgat
actgtaagtttattacgggtaattaatacgcccagacgcggtattggtaaagccaccatt
gaaaacctaacaaacgccgctcaagaattaggtgttagcttgtgggaaatattgagcgat
gaaacatcggttaatactttgggcggacgttcggctaaatcggtaaacaacttcgctaaa
atgattggtcgcttgcagcaagaagttgaaaacctgcctgcttcggaaattttgcaaacc
gttttagatgaatccggctacgttcaagatttgcataaacaaggaaacgacgaagcagaa
gatagaatccgcaacgtcggagaactttataatgcagttcgtcaatatgaagaagaagcc
gaacaagatgcttcccttgctggattcctggctagtaccgctttaagttccgacttggat
aacgtcaaagaagggcaaagtgcagtatccttaatgaccttacattcttccaaaggattg
gaatttcccgtagtctttctagtagggttagaacaaggattatttcccaactatcgttcc
atgaacgacccagcctcattagaagaagaacgtcgtttatgttacgtcggtattacccgc
gctcaagagaggttattcttatcccacgcccgagaacgcaggctgtatggaacacgcgaa
ccagcagtgcgatcgcaatttctcgacgagttaccaagagagttattagctacccaatat
cctcgtagcgttacttatacaaataccggcggtcgtacttcagctagctacaataatggc
tttgaaagtacgagtagtagcaaaccaaccgcaaacgtaaattggcaggttggcgacaaa
gtaatgcataaatcattcggagccggtgaaataactcatatttttggtggaggaaataaa
gtttccgtagccattaaatttcccggcttaggtcaaaaaattatcgaccctagagtagct
caattgcaaaagatggaataa
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