Rivularia sp. PCC 7116: Riv7116_3167
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Entry
Riv7116_3167 CDS
T02364
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Riv7116_3167
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
DnaB_C
AAA_22
SLFN-g3_helicase
GvpD_P-loop
PAXNEB
AAA_7
T2SSE
RecA
ResIII
AAA_14
Sigma54_activat
TrwB_AAD_bind
AAA_19
MEDS
IstB_IS21
Arb1
SRP54
Rad51
Motif
Other DBs
NCBI-ProteinID:
AFY55640
UniProt:
K9RCF8
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Position
3936173..3937738
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AA seq
521 aa
AA seq
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MSEKKKPLHSSNPLVNRGVEKIRTLIEGFDDITHSGLPKGRTTLVSGTSGTGKTLFSLQF
LYNGITHLKEPGIFVTFEEAPNDIIRNAYIFGWDLQQLIDDGQLFILDASPDPEGQEVIG
NFDLSGLIERLQYAIQKYKAKRISIDSVTAIFQQYEAAGLVRREIFRLVARLKGLSVTTV
MTTERREEYGPVATFGVEEFVSDNVIIFRNVLEGERRRRTIEILKLRGTTHMKGEYPFTI
TNQGINIFPLGAMRLTQRSSNARVSSGVESLDKMCGGGFFKDSIILATGATGTGKTLLVS
KFLQEGCHQGERSILFAYEESRAQLSRNATSWGIDFEQLERQGLLKIICAYPESTGLEDH
LQIIKSEISEFKPSRIAIDSLSALDRGVSNNAFRQFVIGVTGYAKQEEITGFFTNTTTHF
LGSNSITDSHISTITDTIILLQYVEIRGEMSRAVNVFKMRGSWHDKGIREYNITRDGPQI
KNSFQDYERIISGVPSRVSIDEKAELSRIVRSFEDEQTSDS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaaaaaaaaccgctacacagtagcaaccctttagtaaatcgaggtgtggaa
aaaattcgcaccttgatagagggtttcgatgatattactcatagtggattgcctaaaggt
agaacaactttggtcagcggtacctctggtacggggaaaacattgttttctttacagttt
ctctacaacggtattactcacttaaaagaaccagggatttttgtcacttttgaagaagct
cccaatgatattatcagaaacgcttatatatttggttgggatttacaacagttaattgat
gatggtcaactatttatccttgatgcttctccagatcccgaaggtcaagaagttatcggt
aactttgatttatccggattgatagagcggttgcaatacgcgattcaaaaatacaaagca
aaacgtatttccattgattcggtaacggcaatatttcagcagtatgaggcggcgggatta
gtcagacgggaaatttttcgtttagttgcacgtttaaaaggtttgagcgttaccaccgta
atgacaaccgagcgaagagaagaatacggtccggtagcaacattcggcgtagaagaattt
gtatccgataacgtcataatttttcgtaatgttttagaaggcgagcgtcgcagacggacg
attgaaattctcaaattgcgcggtacgactcatatgaaaggggaatatccttttacaatt
accaatcaaggaataaatattttcccattaggtgccatgcgtttaactcaacgttcttca
aacgctcgcgtatcttcgggagttgaatctctagataagatgtgcgggggtggatttttt
aaagattcgattattttggctacaggggctaccggtacggggaaaaccttattagtcagt
aaatttttacaagaaggttgccatcaaggcgaacgctcgatactatttgcctatgaagaa
tcccgcgctcaactttcaagaaatgccacttcttggggaattgacttcgagcaactagag
cgtcaaggattgctcaaaataatttgtgcttatcccgaatcaactggcttagaagatcac
ctacaaattattaagtcagaaatttctgagtttaaaccttcccgcattgctatcgattct
cttagtgctttggatcggggggtttctaataatgcattccgacaatttgttattggtgta
acgggttacgccaaacaagaagaaatcactggcttttttactaataccactacccatttt
ttaggttcaaattcgattactgattctcatatttctactattactgacacgattatccta
ttgcaatatgtagaaattcgtggagaaatgtcccgagcagtcaacgtatttaaaatgcgc
ggctcttggcacgataagggtatcagagaatacaacataactcgtgatggtccccaaatc
aaaaattcattccaagattacgaaagaattatcagtggagtgcccagtcgcgttagtatc
gatgaaaaggcggaattatctcgtattgttaggagttttgaagatgagcaaacatctgat
tcttag
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