Rivularia sp. PCC 7116: Riv7116_3332
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Entry
Riv7116_3332 CDS
T02364
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03030
DNA replication
riv03430
Mismatch repair
riv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Riv7116_3332
03430 Mismatch repair
Riv7116_3332
03440 Homologous recombination
Riv7116_3332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riv03032
]
Riv7116_3332
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_3332
Enzymes [BR:
riv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Riv7116_3332
DNA replication proteins [BR:
riv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Riv7116_3332
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Riv7116_3332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Rv2179c-like
LepB_N
Motif
Other DBs
NCBI-ProteinID:
AFY55794
UniProt:
K9REN0
LinkDB
All DBs
Position
4137735..4138541
Genome browser
AA seq
268 aa
AA seq
DB search
MKLNLVRPMAFIDLETTGIDIVKDRIIQIAVLKVFPDGNEEMKTWIINPTIPIPNASSEI
HGIYDEDVKDKPTFAKIAHSLADYINDSDLAGYNSNRFDIPVLIAEFSRVDIDFKLEGRR
IIDVQTIFHKMEPRTLRAAYRYYCGEKLEGAHDAANDIRATYEVFKAQLERYENEEYEDK
DGNISYPVKNNMDELQEFIPFDFLDPTKRVIYDENNEIIFNFGKYKGKSVAESFKKEPNY
YKWMMEKEFSVFTKKAVTKIWESMNQEE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaatttagtacgcccgatggcatttattgacttagaaacaactggaatcgat
attgtcaaagatagaattatacaaattgccgtattaaaagtatttcctgatggcaatgaa
gaaatgaaaacttggataattaatcctactattccaattccaaatgcatcatcagaaata
catggaatttatgacgaagatgtaaaggataaacctacttttgcaaaaatagcccatagt
ttagcagattacattaacgatagcgatttagctgggtataattcaaatcgatttgatatc
cccgtacttatagcagaattttctcgcgttgatatcgattttaaacttgaaggcagaaga
attattgacgtacaaactattttccataaaatggaacctcggactttgagagcagcttat
agatattattgcggggaaaaattagaaggcgctcatgatgcagcaaatgatatccgcgct
acatacgaagtatttaaagcacaattagaacgttacgaaaatgaagagtatgaggataaa
gatggcaatatatcttatcctgtaaaaaacaatatggatgagttgcaagaattcataccc
tttgattttcttgaccccactaaaagagttatttacgacgaaaataacgagataattttt
aattttggtaaatataaaggtaaatcagtagctgaatcatttaagaaagaaccaaattat
tataaatggatgatggaaaaggaattttctgtttttactaagaaagcagtaactaagatt
tgggaatcgatgaatcaggaagaatag
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