KEGG   Rivularia sp. PCC 7116: Riv7116_3425
Entry
Riv7116_3425      CDS       T02364                                 
Name
(GenBank) CRISPR-associated protein, Cas6 family
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
riv  Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:riv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:riv02048]
    Riv7116_3425
Prokaryotic defense system [BR:riv02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Riv7116_3425
   Subtype I-D factors
    Riv7116_3425
SSDB
Motif
Pfam: CRISPR_Cas6 CRISPR_Cas6_N Sigma70_r4_2 Cas6_I-A GerE HTH_23 Sigma70_r4 CENP-B_N HTH_38
Other DBs
NCBI-ProteinID: AFY55881
UniProt: K9REI7
LinkDB
Position
4259834..4260946
AA seq 370 aa
MPIRRTRKKSSAIITLPTDTELVGIVFHISPASNYTIFPEYAKGLHAWFLNQVRQTNPEL
STYLHDGESEKPFTISRLQGKFLSNDAKLQLAADSNYQWYVSALSSRLVAWMADWLQNLP
KTIELHNAPLQIKSVEIAHPATTYKKLLENKKAKNTLSLSYISPTSFRRKKHHFPLPLPF
NIFQSYLRRWNDFSNLPVEQDTFLEWVDENVIIQRHQISTTRVPGGKRGLVTGFTGAVEF
GLGKEASKEPEYVNLYRALGKLAPYCGTGHKTTFGLGQTRLGWLIEEEKIEVVSPQELLA
NRIAQITEILMSKQKRTGGSRAISVCQKRAAIMARRETGESLQDIATDLDIPYETVKTYV
KLTRKMLAES
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcctatacgtagaactcgcaaaaaatcctcggcgataatcactctaccaaccgacact
gagttagtagggatagtttttcatatatcacctgcgagcaattacactattttccccgaa
tacgcgaagggactccatgcttggtttttgaaccaggtacgacaaacgaatcccgaatta
tctacttatctccatgatggggaatcggaaaagccgtttactatttctcgtttgcaggga
aagttcttaagtaacgacgcaaaattacaacttgcggcagattccaattatcaatggtac
gtatctgcgttatcttcgcgactggtggcatggatggctgattggctgcaaaatttaccc
aaaactatcgaactccataacgcacctttacagataaaatccgtagaaattgcccatccg
gcaacaacttacaagaaattactagaaaataagaaagctaaaaatactctttcgttaagc
tatatcagccctactagctttcgtcgcaaaaaacatcattttcctttaccgttacctttc
aatatatttcaaagctatttacgacggtggaatgatttttctaatttaccggtggaacaa
gatacgtttttggaatgggtggacgaaaacgtaattattcaacgccaccaaatttctaca
actagagttcctggcggtaaaagaggtttagttactggatttacgggtgcggtggaattc
ggtttgggtaaagaagcttcaaaagaaccagaatatgtcaatttatatagagctttgggt
aaacttgcaccttattgtggtaccggacataaaacgacttttggtttgggacaaaccagg
ttggggtggttaattgaagaggaaaaaatcgaagtagtatcaccccaagagttattagct
aatagaatcgcacaaattaccgaaatattgatgtccaaacaaaagcgcaccgggggaagt
agggcaatttcggtatgccaaaaacgcgctgcaatcatggcaagacgagaaaccggcgaa
tcactacaagatattgctactgatttagacattccttacgaaacagtcaaaacttacgtt
aaactgacgagaaagatgttggcagaaagttga

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