Rivularia sp. PCC 7116: Riv7116_3822
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Entry
Riv7116_3822 CDS
T02364
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
riv03016
]
Riv7116_3822
Enzymes [BR:
riv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Riv7116_3822
Transfer RNA biogenesis [BR:
riv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Riv7116_3822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Phage_SSB
Motif
Other DBs
NCBI-ProteinID:
AFY56265
UniProt:
K9RE80
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All DBs
Position
complement(4757533..4758507)
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AA seq
324 aa
AA seq
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MLTWEIVTWLLLPNFFREYCSMPYLKSGDEIRSIVAKYTQSQTLWLDTEVADYDTRNPRL
SLIQVLDDSTDLTGESVYILDVLDQPEIVTEFIDTIMINSSVEKVFHNAKYDLRFLGKKK
AKNVTCTLETAKQIPYYVLPLPNYQLKTLAMTLCHFQDIDKQQQSSDWGIRPLSEEQIEY
AYLDCIILAQVHLRLLELTQNINFDAATEDLTLLGAKYVELEQQWKLLKSEFEHLQERIK
QAMLAQNLSETSDFKLNSYERTTTKVPFSELVRLVETKNVDLDFDITLTKDMQKNLGDNL
QQLAVDVSKTSSFRLTSKQGESEE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttgggaaattgtaacttggttacttttacccaatttttttagggaatattgc
tcaatgccttacctaaaatccggtgacgaaatacgttctatcgttgctaaatatactcaa
tctcaaactctttggttagatacggaagttgccgattacgatactcgcaatccgaggcta
tcgctgattcaagttttggatgatagtacggatttaactggggaaagcgtctatatttta
gacgtactcgaccagccagaaattgtgaccgagtttatagatacaattatgataaattcc
tcagtagaaaaagtatttcataatgctaaatacgatttaagatttttaggtaaaaagaaa
gctaaaaatgtcacctgcactttggagacggcgaaacagataccttactatgttttacct
ttacctaactatcaattaaaaactttggcaatgacgctttgccatttccaagacattgat
aaacagcagcaaagcagcgattggggaattagacctttaagtgaagagcaaatagaatat
gcttatcttgactgcattattctggctcaagttcatttacgtttattagaattaactcaa
aatataaactttgatgctgcaacagaagatttaactttgcttggtgcaaaatatgttgaa
ttagagcagcagtggaagttgttaaaatctgaatttgagcatttacaggaacgaattaaa
caagcaatgctagctcaaaatttatctgaaacctcagattttaaacttaatagttacgaa
cgcacaacaactaaagtgccattttccgaactggtacggctggtagagactaaaaatgta
gatttagattttgatattactttaactaaggatatgcaaaagaatttaggggataaccta
cagcaacttgctgtagatgtttctaaaactagtagtttcaggttaacttctaaacaggga
gaaagtgaagaataa
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