Rivularia sp. PCC 7116: Riv7116_4358
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Entry
Riv7116_4358 CDS
T02364
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_4358
Enzymes [BR:
riv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Riv7116_4358
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Riv7116_4358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFY56783
UniProt:
K9RH33
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All DBs
Position
5461326..5462819
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AA seq
497 aa
AA seq
DB search
MTTGIWILGDQLYLTQAALQTCNNSSKTPIIFIESYSHIKKIKYHKQKLVFIWSAMRHFA
DELRQQGYSVTYEIAEDFQNPLESWINENQIDELQIMSPNDKPFLQTIENLKLPCDINLL
PNNQFLWTSEDFHKWAKNRKRLLMEDFYREGRKRFDILMEDDKPVGGKWNLDKENRKPPK
GKLNTPEPLWFEADNITQEVIQQVNSLDIPTYGEVKEFRWGVTRLQALKVLKYFIEVRLP
DFGPYQDAMVTGEETMWHAMLSPYINIGLLQPLEIIQAAEQAYEENQLALNSVEGFIRQV
LGWREYMHGIYHHVDADYPEQNWFEHHKPLPEFFWNGETKMNCLHQVLTQVMDTGYAHHI
QRLMVLNNFGLIAGISPQQLENWFHAAFIDAYDWVMQTNVIGMGQYADGGLLASKPYAAS
ANYINKMSDYCKSCYYKHSKRTGEKACPFNFLYWDFLNRHRDKLKNEGRMNFILRNLDKM
SPEELETIHQQAEEIIA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccggtatttggatattaggcgaccaactatatttaacccaagcagctttacaa
acttgtaataactcctcaaaaacaccaattatcttcatcgaatcctattcccatatcaaa
aaaattaaatatcacaaacaaaagttggtatttatttggtcagcaatgcgtcattttgcc
gacgaattgcgtcaacaaggttattcagtaacttacgaaatagcagaagattttcaaaat
cccctggaatcatggataaacgaaaatcaaattgacgaattacaaatcatgtctcccaat
gacaaaccttttctacaaacaatcgaaaatttaaaattaccttgcgatattaacttactt
cccaacaatcaatttttatggacttctgaagattttcataaatgggctaaaaatcgcaag
cggttgttaatggaagacttttacagagaaggaagaaagcgtttcgatattttgatggaa
gatgataaacccgttggcggaaaatggaatcttgataaggaaaatcgcaaaccacccaaa
ggtaaattaaatactccagagcctttatggtttgaagcagataatattactcaagaagta
attcaacaagttaattcccttgatatcccaacctatggagaagttaaagaatttcgctgg
ggagtaactcgtttacaagcattaaaagtattaaaatattttatcgaagttcgtttacca
gattttggaccatatcaagatgcgatggtaacaggagaagaaacaatgtggcacgctatg
ctttctccctacattaatattggtttactgcaacccttagaaataattcaagcagcagag
caagcttatgaagaaaatcaacttgcattaaatagcgttgaaggtttcatccgtcaggtg
ttgggatggagagaatatatgcatggaatttatcatcatgtagatgctgattatccagag
cagaattggtttgaacatcataaaccattacccgaattcttttggaatggggaaaccaaa
atgaactgtctgcatcaagtattaactcaggtgatggatacaggttatgctcatcatatt
caaagattgatggtattaaataactttggtttaattgccggaatatcaccgcaacaattg
gaaaactggtttcatgcagcatttatagacgcttacgactgggtaatgcaaaccaatgtt
ataggcatggggcaatatgcagatggtggtttactcgcatcaaaaccttatgcagcatca
gctaactatattaataaaatgagcgattattgtaaaagttgttattacaagcattcaaaa
cgtaccggagaaaaagcttgtcccttcaacttcttatattgggattttttaaatagacat
cgggataaattgaagaatgagggaaggatgaattttattttgaggaatcttgataagatg
tctcccgaagaattagaaaccattcatcagcaagcagaagaaataattgcatga
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