Rivularia sp. PCC 7116: Riv7116_4425
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Entry
Riv7116_4425 CDS
T02364
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Riv7116_4425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_4425
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Riv7116_4425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AFY56846
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Position
complement(5537889..5540450)
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AA seq
853 aa
AA seq
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MTASKNQSTTTIVDHRTVDISKLSQMYQHYVETKEKHPHAVLFYRVGDFFECYFEDAVTL
AQELELVLTSKQAGADVGRVAMSGVPHHSWERHATGLVEKGYAVVICDQVEDASQVTGGR
LVKREITRILTPGTLLEDGMLKASRNNYLAAVVIAGDNWGLAYADISTGEFLTTQTNNLE
HLTQELMRLQPSEVLFPTNAPDLGALLRPGEKSNSLPECLPTSFCYSLRSQVPFSSGEAR
SRLLLKFKVRSLEGFGCDSLTLAVRAAGGLLEYLEETQKENKVPLQPLRTYTFTDFLVVD
YSTRRNLEITQTIRDGTYHGSLSWAMDRTTTAMGGRALKRWLLQPLLDIKGIKARQDTIQ
ELTENTTLRQDLRGLLKQIYDLERLSGRSGSGTANARDLFALADSLSKLPQLGNLVKDAR
SPFLKALQKVPPSMQELADKIKAHIVESPPIQIKEGGLIREGINPLLDERKELVEEDQKW
IANLEIDERERTGIPKLKVGYNKTFGYYLSVSRALAEKVPDNYIRKQTLTNEERYITPEL
KEREARILTARDDLNKLEFDIFLALREEVGSQAEIIRNISRAVAAADVLCGLAELAVFQG
YCRPEIVEGREITIIDGRHPVVEQSLPAGFFVPNSTYLGREENGDTNNSPDLIILTGPNA
SGKSCYLRQVGLIQLMAQVGSYIPATSATLGVCDRIFTRVGAVDDLATGQSTFMVEMNET
ANILNHGTSKSLVLLDEIGRGTATFDGLSIAWAVGEYIATELLARTIFATHYHELNELAS
LLDNVANYQVTVKEMPEQIIFLHQVQPGGADKSYGIEAGRLAGLPATVIKRAKQVMGQIE
QHSKIAIGLKSLD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatctaaaaaccaaagtacaacaacgatcgttgaccatcgcacggtggatatc
agtaagctgagtcagatgtaccagcattatgttgaaaccaaggaaaaacatcctcatgcg
gtgcttttttaccgggtaggtgatttttttgaatgttattttgaagatgctgtcacctta
gctcaagaattagaactggttttaactagtaaacaagctggtgctgatgtgggaagggta
gcgatgagtggtgttccccatcattcttgggagcgtcatgctactggcttagtagaaaaa
ggttatgcggtagtaatttgcgaccaggttgaagatgcttctcaggtaactggtggtcgt
ttggtgaaaagggaaattaccagaatattaactcccggtactttgttagaagatgggatg
ttgaaagcaagtcgcaacaattatttagctgctgtggtaattgcaggggataattggggt
ttggcttatgccgatatttctactggagaatttttaactactcaaactaataatttggag
catttaactcaagagttgatgcgattgcagccgagtgaggtgttatttcctaccaatgct
ccggatttaggtgccctacttcgacctggtgaaaagtccaatagtttaccagaatgtctg
cctacttctttttgttattcgttgcgatcgcaggttcctttttcgagtggggaagctaga
agtcggttattactaaagtttaaagtccgctctctggaagggtttggttgcgacagtctg
actttagccgttcgtgctgctggtggtttattggaatatttggaggaaactcagaaggaa
aataaggttcctttgcaacctttacgaacctatacttttactgactttttagttgtagat
tattcaaccagacgcaaccttgaaattacccaaacaattcgcgacggtacttatcatggt
tcgttatcctgggctatggatagaacaactacggcaatgggtggacgtgctttaaaaaga
tggttattgcagccgttgttggatattaagggaattaaagctaggcaggatacgatacag
gaattaacggaaaatacaactttacgtcaagatttacgggggttgttaaaacagatttac
gatttagaaaggttatcggggcgctctggctctggtactgccaatgccagggatttgttt
gctttggctgattctttatcaaagttaccgcagttgggtaatttagttaaggatgctcgt
tctccttttttgaaagctttgcaaaaagttccgccaagtatgcaagagttagcggataag
ataaaagctcatattgtggaatctcctccgatacaaattaaggaaggtggtttaattagg
gaagggataaatcctttattagatgaaagaaaagaattagttgaagaagaccaaaagtgg
attgctaatctagagattgatgaaagggaaagaacgggaattcccaaactaaaggttggt
tataacaaaacttttggttattatctcagcgtttctcgcgctttagctgagaaggtaccg
gataattatattcgcaagcaaactttaactaatgaagaacgatatattactcccgaatta
aaggaaagggaagcaagaattttaactgcaagggatgatttgaataagttggaatttgat
atttttcttgctttaagggaagaagttggttctcaagctgaaattatccgcaatatttcc
cgtgctgtcgctgctgctgatgtgttgtgcggtttagctgaattagcggtatttcaaggt
tattgtcgtccggaaatcgttgaaggaagagaaattacaattattgatggcagacacccg
gtagttgaacaatctctacccgctggtttctttgtaccaaattcaacttatttgggaagg
gaagaaaatggagatacgaacaattctcccgatttaattattttaactggcccaaatgcc
agcggtaaaagttgttacttgcgtcaggtgggattaattcaattaatggcgcaggttggc
agctatattccagcaacctcagcaactctaggtgtttgcgatcgcatatttactcgtgta
ggtgcggtggatgatttagctaccggacaatcgacttttatggtggaaatgaacgagacg
gcgaatattctcaatcacggtacttcaaagtcgttggtattattagatgaaattggcaga
ggtacggcaacttttgacggactttctatcgcatgggcagtaggagaatatatagccaca
gaacttttagccagaacaattttcgcaactcactatcacgaactcaacgaattagcatct
ttgttggataacgttgctaattatcaggtgacggtgaaagaaatgccggagcaaattatc
tttttacatcaagtacaaccaggtggtgctgataaatcttacggtattgaagcgggaaga
ttggcaggtttaccagcaacggtaattaagcgagctaagcaggttatgggacaaattgaa
cagcatagtaaaattgctattggtttaaaatctttggattaa
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