Rivularia sp. PCC 7116: Riv7116_4656
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Entry
Riv7116_4656 CDS
T02364
Name
(GenBank) putative collagen-binding protein
KO
K20276
large repetitive protein
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Riv7116_4656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
CarboxypepD_reg
SpaA
CarbopepD_reg_2
EMC7_beta-sandw
fn3_3
Y_Y_Y
MetallophosN
bMG3
phage_tail_N
DUF1416
Motif
Other DBs
NCBI-ProteinID:
AFY57075
UniProt:
K9RGJ5
LinkDB
All DBs
Position
complement(5832539..5840137)
Genome browser
AA seq
2532 aa
AA seq
DB search
MKALFKHLSSITQGEPGSVANNTRLSSRNISSPFLSTTLLAVLLGVPQIPIMSSGKAIAQ
NAASCPAGTTPETIQFNASDSLQDLTQIYSIGGIRTVLSFIEEVPNRVIDRTESRIDGGV
YGGLQGPNLRLNIGPGKPPETGNLAPGSATLTITFAQPVTLASPLTLLDVDQEGERDSGR
FFRDIATVTAANNNSNVAVNLQALGSFTQVSGNTASGTTENSLPDQGQGNVSVTPQGAVD
QINITYTPDTSQQRGQDQTIGLAPFTICAPGDAGTIGDTVYQDLNGDGTQNPGEAGIPGI
NLTLINPGPDGQFGTPDDTTETTTTDNNGRYNFPVPAGNYRVTVDNPPQGFSPTQTPPQT
IVVAAGQNFDTADFGFLPQQIGSIGDTVYRDNNNNNVQDEGDTGIPGVQVTLTSPGADGQ
LGTPDDTNQTTTTNEQGIYTFPNLPAGNYQVTSATPDALNPTQTQPNPVELQPGQNIDTV
DFGFAPTPGGTVGDTVYRDENGDGTQNEGEPGLPGVEVTLVNPGPDGQFGTPDDTTQTTT
TDENGTYGFPNVPPGDYQVVVNNPPDGLTPTQTPPQTVTVQPGQNFEDADFGFSPQQTGS
IGDTVYRDNNNNNVQDEGDTGIPGVQVTLTSPGADGQLGTPDDTNQTTTTNEQGIYTFPN
LPAGNYQVTSATPDGLNPTQTQPNPVELQPGQNIDTVDFGFSPPQGGTVGDTVYRDENGD
GTQNEGEPGIPGVEVTLVNPGPDGQFGTPDDTTQTTTTDENGTYGFPNVPPGDYQVVVNN
PPDGLTPTQTPPQTVTVQPGEDFEDADFGFAPQQIGSIGDTVYRDNNNNNVQDEGDTGIG
GVQVTLTSPGADGQLGTPDDTTQTTTTNDQGIYTFPNLPAGNYQVTSATPDGLNPTQTQP
NPVELQPGQNIDTVDFGFAPTPGGTVGDTVYRDENGDGTQNEGEPGLPGVEVTLVNPGPD
GQFGTPDDTTQTTTTDENGTYGFPNVPPGDYQVVVNNPPDGLTPTQTPPQTVTVQPGEDF
EDADFGFSPQQIGSIGDTVYTDGNSNNQQDEGEEGIPGATVTLTLPGPDEQLGTGDDTTQ
TTTTNEQGIYTFPNLPAGNYRVTATSPREGDNPTQTQPDAVELQPGQNLDTVDFGFVPGP
LGQGQGTIGDTVYNDTNRNNQQDEGETGIPGATVTLTNPGEDGEFGTPDDTTQTTTTNEN
GNYSFPNLPAGNYRVTTTTPDGLTPTQTPDETVALAQNQNLDTVDFGFAPQEDGTGSIGD
TVYNDTNSNNQQDEGETGIPGVTVTLTTPGEDGQFGNEDDTTQTTTTNEQGIYGFTNLPP
ANYRVTTETPNGLNPTQTQPDVINLQGGQNIDTIDFGFAGQDQGTGSIGDTVYNDTNRNS
QQDEGETGIPGVTVTLTSPGEDGQLGTPDDTTTTTTTNEQGNYNFPNLPAGNYRVTITNP
DGLTPTQTPPETIELEENENDDTVDFGLAPAQGTGSIGDTVYNDTNRNSQQDEGETGIPG
VTVTLTSPGEDGQLGTPDDTTTTTTTNEQGNYNFPNLPAGNYRVTITNPDGLTPTQTPPE
TIELEENENDDTVDFGLAPAQGTGSIGDTVYNDTNRNNQQDEGETGVPGVIVTLTTPGED
GQLGNEDDTTQTTTTDEQGNYNFPNVPAGNYRVTITNPDGLSPTQTPPETVTVGDNQNID
TADFGLAPGQQQGTGSLGDTVYNDLNNNGQQDEGEPGIAGVVVNYAGTGPDGVFGESLTD
DDTSGRTSTDANGRYTFPNLPAGTYRVTINDQSQQPIREFSQTQTPNNPITLNEGDNIDT
ADFGFTQPTGTIGDTVYQDNNSDGTQNEGEPGIPGVEVTLTRPGEDGQLGTPDDTTDTTT
TNDQGNYSFPNVPTGNYRVTVNNSPDGLNPTQTPPSNIPLQPGQNFNDADFGFSPQQVGT
IGDLVFFDNDGDSTPDNDESGIPGLTLVLRDANGNVVATTNTDEDGAYSFVAPPGTYTVT
VSNPPQGLNPTLTQDNPVNLQAGQNIDTVDFGFQPPSTGSIGDTVFADENGNGVQEPGEP
GVSGVVVRLVRPGQDGVFGTGDDQVEEQRTDNTDTVAFNENTPGQYTFDNLPPGDYQVQM
VLPDGSILTTGANPISVDLQPGQNLDSADFGIRMTGFGGENPGSIGDEVFNDTDGDGVRD
EGEPGVPNVTVTLTQPGPDNQLGTADDTTQETTTNDQGNYTFGDLPPGPYRITVTPPLNL
SEVTNPGGSQIERNLQPGQDLTNADFGLRGPSGGSIGDTVFNDTDGDGVQDFTDSNNNGV
KEPNEEGEAGIPGVQLTLRNANGDIFATTTTNENGNYIFNGLPLANYTVEAARPNDFSPT
TETTLSAQLTEATPNRNEIDFGFRPGLLGASGPTNLRLVKRITNVLRGNQPISGVNFNQF
EDDANDENDNVLNSSPQSSPVGITRLETPVQSGDEIEYTIYFLSEGGEALQNVRVCDVVP
NGTAFVNGSITVNGGGNGADNGNFLTPLSPVPAEFQNICLNGTPANGAVLTNLGTLPAGG
QFGFVRFRVRVN
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctttatttaagcatttatcgtcaattactcaaggggaaccgggttcggtggca
aataatactaggctatcatcaagaaatatctccagtccctttctgtctacgactttatta
gcggttttgttaggcgtaccccaaataccaataatgagtagtgggaaggccatagcgcaa
aacgcagcaagttgtcctgcgggtaccacaccagaaacaatacagttcaacgctagcgat
agcctgcaagatttaacacaaatctatagtatcggcggaatacgtactgtcttatctttc
attgaagaagtacccaatcgagttattgatagaaccgaatcaagaattgatggtggtgtt
tatggtgggcttcaaggaccaaatctacgtttaaatattggtcctggtaaaccaccagaa
acgggtaatctagcaccaggatctgcaactcttactattacttttgctcaaccagttacc
ttagcatcccctttaactttgttggatgttgaccaagaaggcgagcgagatagcggtaga
tttttccgagatatagctaccgttactgcggctaataataattccaacgttgctgttaat
ctgcaagcgcttggttcgttcacccaagtttctggtaatacagcttctggtacaacagag
aactcattgcccgatcaaggtcaaggtaacgtttctgtaacaccccaaggtgctgttgac
caaatcaacattacttatacaccagatacttctcaacaaagaggacaagaccaaactatc
ggtttagcaccattcactatttgtgcgccgggggatgcaggtaccattggtgatacggtt
tatcaagatctcaatggcgacggtacgcaaaatcctggcgaagcagggattcctggaatt
aatttaactttaataaatcccggtcctgacggtcaatttggcactcccgacgacactaca
gaaaccactacaactgataataacggaagatacaatttccccgtacctgctggtaattac
cgagttactgttgataatcccccccaaggtttcagtccaactcaaacaccaccacaaact
attgttgtagcagcaggtcaaaattttgatactgctgattttggttttctaccgcagcaa
ataggtagtattggcgatacagtttatcgggataacaataacaacaacgtccaagacgaa
ggcgatactggaattcctggagtacaggtaactttaaccagcccaggtgccgacggacaa
ttaggtactcctgacgatacaaatcaaaccacaactaccaacgaacaaggtatttacacc
tttcccaacttacctgctgggaattatcaagtaacctcagcaacacccgatgctttgaat
ccaactcaaacccaacccaatcctgtagaattacagcctggtcaaaatattgacacagtt
gactttggtttcgcaccaactccaggtggtacggttggagatacagtttaccgagatgaa
aacggtgacggaactcaaaacgaaggcgaaccgggacttcctggcgttgaagttacctta
gttaatccaggtcccgacggtcaatttggtaccccagacgacacaacgcaaaccacaact
accgatgaaaacggtacttatggttttcccaacgtacccccaggtgactatcaagttgtt
gttaataatcctcccgacggattaaccccaactcaaaccccaccgcaaactgttaccgta
caacctggtcaaaattttgaagatgctgatttcggtttctcaccgcagcaaactggtagt
attggcgatacagtttatcgggataataacaacaacaacgtccaagacgaaggcgatact
ggaattcctggagtacaggtaactttaaccagcccaggtgccgacggacaattaggtact
cctgacgatacaaatcaaaccacaactaccaacgaacaaggtatttacacctttcccaac
ttacctgctgggaattatcaagtaacctcagcaacacccgatggtttgaatccaactcaa
acccaacccaatcctgtagaattacagcctggtcaaaatatcgatacagttgactttggt
ttctcacctcctcaaggcggtacggttggagacacagtttaccgagatgagaacggtgac
ggaacccaaaacgaaggcgaaccgggaatccctggcgttgaagttaccttagttaatcca
ggtcccgacggtcaatttggtaccccagacgacacaacgcaaaccacaactaccgatgaa
aacggtacttatggttttcccaacgtacccccaggtgactatcaagttgttgttaataat
cctcccgatggtttaacaccaactcaaaccccaccgcaaactgttaccgtacaaccaggt
gaagattttgaagatgctgatttcggtttcgcaccgcagcaaataggtagtattggcgat
acagtttatcgggataataacaataacaacgtccaagatgaaggcgataccggaattggt
ggagtacaggtaactttaaccagtccaggtgccgacggacaattaggtactcctgacgat
acgactcaaaccaccactaccaacgaccaaggtatttacaccttccccaacttacctgcg
ggaaattatcaagtaacctcagcaacacccgatggtttgaatccaactcaaacccaaccc
aaccctgtagaattacaaccgggtcaaaatatcgatacagttgactttggtttcgcacca
actccaggtggtacggttggagatacagtttaccgagatgaaaacggtgacggaacccaa
aacgaaggcgaaccgggacttcctggcgttgaagttaccttagttaatccaggtcccgac
ggtcaatttggtaccccagacgacacaactcaaactacaactaccgatgaaaacggtact
tatggttttcccaacgtacccccaggtgactatcaagttgttgttaataatcctcccgac
ggtttaaccccaactcaaaccccaccgcaaactgttaccgtacaaccaggtgaagatttt
gaagatgctgatttcggtttctcaccgcagcaaataggtagtatcggagacacagtttat
acagatgggaatagcaacaatcaacaagatgaaggggaagaaggtattcctggagctaca
gttaccttaactcttccaggccccgacgaacaattaggtactggtgacgatacgactcaa
accaccactaccaacgaacaaggtatttacaccttccccaatcttcctgcgggtaattac
agagttaccgcaactagtcctagagaaggagataaccccactcaaacccaacctgatgct
gtggaattacaaccaggtcaaaacttagatacagttgactttggttttgtaccgggacca
ttaggacagggacaaggaactattggggatacggtttacaacgataccaaccgtaacaac
cagcaagatgaaggtgaaaccggtattcctggagcgacagttactttaactaatcccggt
gaagatggtgaatttggtactcctgacgataccacacaaaccacaaccaccaatgaaaac
ggtaattacagtttccccaatttacctgcgggcaactatcgagttactaccactacccca
gatggtttaactccgactcaaaccccagatgaaacagttgctttagcacaaaatcaaaat
ttagatactgttgatttcggtttcgcgccacaagaagacggaacaggttctatcggagac
acagtttataacgataccaacagtaataaccaacaagatgaaggtgaaactggtattcct
ggggttacggtgacgttaacaactccgggtgaagacggtcagttcggtaacgaggacgac
actactcaaaccacaactaccaacgaacaaggtatttacggtttcactaacttacctcca
gcaaactacagagttactactgaaacccccaacgggttaaatccgactcaaacccaaccg
gatgtaattaacctgcaaggcggtcaaaatattgatacgattgacttcggttttgcagga
caagatcaaggaacgggttctatcggggatacggtttacaacgacaccaatcgtaatagt
cagcaagatgaaggtgagactggtattcctggagtcacagttaccttaaccagtcccggc
gaagatggtcaattgggtaccccagacgatacaaccactaccacaaccaccaacgaacaa
ggtaattacaacttccccaacttacctgctggtaactacagagtgacaattaccaatccc
gatggtttgactccaactcaaaccccacccgaaaccattgagttagaagaaaatgaaaac
gatgacaccgttgactttggtttagcacctgcacaaggaacgggttctattggggatacg
gtttacaacgacaccaatcgtaatagtcagcaagatgaaggtgagactggtattcctgga
gtcacagttaccttaaccagtcccggtgaagatggtcaattgggtaccccagacgataca
accactaccacaaccaccaacgagcaaggtaattacaacttccccaacttacctgctggt
aactacagagtgacaattaccaatcccgatggtttgactccaactcaaaccccacccgaa
accattgagttagaagaaaatgaaaacgatgacaccgttgactttggtttagcacctgca
caaggaacgggttctatcggggatacggtttacaacgataccaaccgtaacaaccagcaa
gatgaaggtgaaacaggtgttcctggagtcatcgttactctaactactcccggcgaagat
ggtcaattgggtaacgaagacgatacaactcaaaccacaaccaccgacgaacaaggaaat
tacaacttccccaacgtacctgctggtaattacagggtgacaattaccaatcccgatggt
ttaagtccaactcaaaccccacccgaaaccgtaacagtaggagacaaccaaaacatagac
acagctgactttggtttagcaccaggacaacagcaaggtactggttctcttggtgacacc
gtttataacgatttgaacaataacggtcaacaagatgaaggtgaacctggaatagctggt
gtagttgtgaattatgcaggaacagggccagacggcgtgtttggtgaaagtctaacggat
gacgataccagtggtagaactagtaccgatgctaacggtagatataccttccccaactta
cctgcgggaacatatcgagttactatcaacgaccaatcacagcaaccaattcgagaattt
agtcaaacccaaactccaaataatccaattaccttgaatgaaggggataacatagatacc
gctgatttcggtttcacacaaccaaccggtacaatcggcgataccgtttatcaagataac
aatagcgacggtactcaaaacgaaggtgaacctggaatccctggtgtggaagttacgtta
actcgtccaggtgaagacggacagttgggaactccagacgatactaccgacactaccact
accaatgaccaaggtaattatagtttccccaacgttcctactggtaactacagagtcacg
gttaataattctcccgatggtttaaacccaactcaaacaccaccaagtaatattccttta
caaccaggtcaaaactttaatgatgctgactttggtttctcaccacaacaagtaggaacc
atcggagatttagtattcttcgataatgacggagatagcactcccgataatgacgaaagc
ggaatccccggactaactttggtacttcgagacgctaatggtaatgtagttgcaactacc
aatactgatgaagacggtgcttacagctttgttgcacctccgggtacctacaccgttact
gtgagcaatcctcctcaaggtttaaatcccaccttgacgcaagacaacccagttaactta
caagccggtcagaatattgatacagttgactttggcttccagccaccatcaactggttca
attggcgataccgtgtttgcagatgaaaatggtaacggcgttcaagaaccaggagagccg
ggagttagcggtgttgtagtccgattagttcgtcccggacaagatggcgtattcggtact
ggcgacgaccaagttgaagaacaacgtaccgataatactgacaccgttgctttcaacgaa
aatacccctggtcaatacacctttgacaatcttccaccaggagattatcaagtacaaatg
gtgctgcctgacggtagtattttgacaacgggtgccaatccaatttcagtagatttacag
ccaggacaaaacttagatagtgctgatttcggtattaggatgaccggattcggaggcgag
aatcctggttcaatcggcgatgaagtctttaatgacacggacggtgatggtgtaagagat
gaaggagaacccggagttcctaacgttaccgtaactttaactcagcccggacccgacaac
caattaggtactgccgacgataccactcaagaaactactaccaacgaccaaggtaattat
acttttggcgatttaccaccaggaccttacagaattacggtgactcctcctttaaatcta
tcggaggtaactaatcctggcggttcgcaaatcgaaaggaatttacaaccgggacaagat
ttaactaacgctgactttggcttacgcgggccgagtggtggctctatcggcgataccgta
tttaacgatacggatggtgacggagtacaagactttaccgatagcaataacaacggtgtt
aaagaaccaaacgaagaaggtgaagcaggaatccccggagttcagttaaccttaagaaat
gctaacggcgatatatttgccaccacaaccaccaacgaaaacggtaactatatctttaac
ggtttacctttagctaactataccgttgaagcagccagacctaatgactttagtccaacc
accgaaaccacattatcggctcagttaaccgaagcaactccaaatagaaacgagatagac
tttggtttccgtcccggtcttttgggagcatccgggccaacaaatttacgtttagttaaa
cggattaccaacgtattgagaggaaatcaacccatcagcggtgttaactttaaccagttt
gaagatgatgctaacgatgaaaatgataatgttctcaactcttctccacaatcttcacct
gtaggtattactcgcttagaaacaccagtacaaagtggtgatgaaatagaatacacgatt
tacttcttaagcgaaggtggggaagccctgcaaaacgtcagggtttgtgacgtagttcct
aacggcacagcttttgtaaacggtagtattaccgtaaatggcggtggtaatggtgcagat
aatggtaacttcctaacgcctttatctccagtaccggcagaattccaaaatatttgtctt
aacggtacccccgcaaatggtgcggtacttaccaacctcggtaccttaccggcaggcgga
caattcggatttgttcgcttccgcgtcagagttaattaa
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integrated database retrieval system
