KEGG   Rivularia sp. PCC 7116: Riv7116_5035
Entry
Riv7116_5035      CDS       T02364                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
riv  Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:riv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:riv02048]
    Riv7116_5035
Enzymes [BR:riv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Riv7116_5035
Prokaryotic defense system [BR:riv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Riv7116_5035
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C SNF2-rel_dom
Other DBs
NCBI-ProteinID: AFY57437
UniProt: K9RK31
LinkDB
Position
6312935..6316072
AA seq 1045 aa
MSEASAVQRPMLKYANQIGWDYLSTKEALQRREGKGEDKLKERYLTDILRTQLIKLNPGV
VTSNNVDEILRRLRNLDSTIAGNREALNWLQGKESIFVETENRDRNVTLIDFNNPENNIF
QVTDEWTQKGVIVKNRADVIFLINGIPVAIAEAKGERKTDGLALGINQIRRYHNETPEIL
TFPQLFEVTELWNFWYGLTWNTNRKNLFEWKLTSPLTPPLQGKGNKVIQEGDYEEKIKTF
FDKQRFLKVLRYYIVFLERDEGLTKVVLRQHQTRAVEKVIERIQDNTKKKGLVWHTQGSG
KTLTMITVAALLRNISGDNTVIMIVDRNELENQLDKNLIAYGIKSYELAENKVELQQLIR
DDYRGLIVAMIHKFDKMDVVNQRSTISVLVDEAHRTTGGNFGIYLMAALPNATFIGFTGT
PVSKVAKGKKSTFDTFGEPSDDKKTLDLYSTADSVRDGTTLQLNYALAASEFLVPKEILE
QEFLQLQNTEDVSDIEELDGILQRAVNLRNFLKSDDRVDKVAQFVAKHFRETVEPMGFKA
FLVGVDREACKLYKQALDKYLPAEYSKVVYSRTTEEGLREYNLTETKEKEVRKAFIKKSV
VSAQIILSKKAVDFIESRPQDFTYDSNSNLTITGNCSREDVQTLENYCDNEPDAVSKIRQ
LYEDYSKGLPKILIVTEKLLTGFDAPILYCMYLDKPMRDHVLLQGIARVNRPYADASGLV
KPYGFVLDFIGIFGENLEKALSFESGEINHVIQNLDVVKQELNSLMEDTAPVYLPLARGW
DDKAKEKAAVHFADKEIREEFFRFARKLQTIYEILSPDPDLGGEFMKKYKAIVRLYATIR
AAYNTNPYIDLELVAKTKELVRRNVKIGELEMPGTIHQLNAEQLEKFRQTDTTDNVKILN
LSKAISKDVIEGSARSPFLISIGERAEKVRQAFENRQIEASEALTQLNEIADERVEAEQE
RQQLDVDENTFAIYTVIKQAVDNQNVEQAKTINAVYSNFPDYWWDARQEIDLRTELYATL
YPLTNEVEKTIEVSNNLLKLERVES
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgagtgaagcctccgccgttcaaagaccaatgctaaaatatgccaatcaaattggctgg
gactatttatctacaaaggaagcattacaacggcgagaaggaaagggagaggataaactc
aaagagcgctacttaaccgatattctccgcactcaactaattaaactcaaccccggtgtt
gtcacttctaacaacgttgatgaaattcttcgtcgtctgcgtaaccttgatagtaccatt
gcaggcaaccgcgaagctttaaactggttgcagggtaaagaatctatctttgtagaaaca
gaaaaccgcgatagaaacgttactcttatagactttaacaaccccgaaaataacatcttc
caagttactgatgaatggacgcaaaaaggtgtaatagttaagaaccgggctgatgtaatt
tttctgatcaacggtattcccgtcgctatagcagaagccaagggagaaaggaaaactgat
ggtttagcattgggaatcaaccaaattcgtcgctaccacaacgaaactccggagatactt
acttttcctcaactctttgaagtcaccgaactgtggaatttttggtatggcttaacctgg
aatactaaccgtaagaatttatttgagtggaaattgacctctcccctaacccctccccta
caagggaaggggaataaagttattcaagaaggggattacgaagagaaaatcaaaaccttc
tttgataaacaacggtttttgaaagttctcagatattatattgttttcctcgaacgagat
gagggtttaactaaagttgttctccgtcaacatcaaacccgtgctgttgagaaagtcata
gaacggattcaagacaataccaagaaaaagggacttgtttggcatacccaaggtagcggt
aaaaccctgacgatgattacagttgctgctctactccgcaatattagcggtgataacact
gtaattatgatagttgaccgcaacgagctagaaaatcaacttgataaaaatcttatagct
tacggtattaaaagctatgagttagcagaaaataaagtcgaattacagcaacttatccgt
gatgattatcgtggcttaattgtggcgatgattcacaagtttgacaaaatggatgttgta
aaccagcgttctacaatttccgttttagtagatgaagcgcaccgtacaactgggggtaat
ttcggaatttacttaatggctgcgcttcccaatgcaacttttatcggtttcacgggtaca
ccagttagtaaagtagcgaaagggaaaaaaagcacattcgacacattcggcgaacctagt
gacgacaaaaagactttagacctttattctaccgccgactcggtaagagatggtacgact
ttacaactcaattatgctcttgctgcatcggagtttctggttcccaaagaaattttagaa
caagaatttttacaattacaaaacaccgaagacgttagcgatattgaggaacttgacggt
atacttcaacgggctgttaatttaagaaacttcctcaaaagcgatgacagagttgataaa
gttgctcaattcgtcgccaaacatttccgcgaaactgttgaaccaatgggtttcaaagcc
tttttggtaggtgtagaccgcgaagcctgtaaactttataaacaagcccttgacaaatat
ctccctgctgaatattcaaaagttgtttattcccgtaccactgaggaaggattgcgagaa
tataatcttacagaaacaaaagagaaagaagtccgcaaagcttttattaaaaaatccgtt
gtttccgctcaaattattttatctaaaaaagctgtagattttattgaatctcgtcctcaa
gattttacttacgactccaacagcaatttaactattacaggtaactgttcccgtgaagat
gttcaaaccctagaaaactattgcgataacgaaccagatgcagttagtaaaatccgtcaa
ctttacgaagactacagcaaaggattacccaaaatcctcatcgtcaccgagaaactgcta
acgggttttgatgcaccgatactttactgtatgtatctcgacaaaccaatgcgcgaccat
gttttattacaaggaatagcgcgtgttaaccgtccctacgcagatgcatccggcttagtt
aaaccctacggttttgttctcgattttatcggcatttttggggaaaatctagagaaagct
ttatcatttgaatctggagaaattaaccacgtcatccagaatcttgatgttgtgaaacaa
gaactaaatagtttaatggaagacactgcacctgtgtatttaccattagctagaggatgg
gacgataaagccaaagaaaaagctgcggtacattttgctgataaagaaatacgagaagaa
ttctttagatttgcccgaaaattgcagactatttacgaaattctctcacccgacccagat
ttaggtggggaattcatgaaaaaatacaaagccattgttagactttacgccacaatacgc
gcagcttataataccaatccttacatagatttagaactcgtcgccaaaaccaaagaacta
gtacgtcgtaacgttaaaattggcgagttagaaatgccgggaacgattcaccaacttaac
gccgaacaattagaaaaattccgtcaaactgacacaaccgataacgttaaaattctaaac
ttaagtaaggcaatttccaaagacgtaattgagggaagtgcgcgatcgccatttttgatt
tccattggtgaacgagccgagaaagtccgtcaagcctttgaaaaccgccaaatagaagct
tctgaagctttaactcaactaaatgaaatagccgacgaacgtgttgaagcagagcaagag
cgtcagcagctagatgttgatgaaaataccttcgccatctacactgtcattaagcaagca
gtagataaccaaaatgtcgagcaagctaaaaccattaacgcagtttacagcaacttcccc
gattactggtgggatgctcgtcaagaaatcgacttaagaacagaactctacgctactctt
taccccttaacaaacgaagttgagaaaacaattgaagttagtaataacttactaaaacta
gaacgggttgaatcatga

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