Rivularia sp. PCC 7116: Riv7116_5111
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Entry
Riv7116_5111 CDS
T02364
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_5111
Enzymes [BR:
riv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Riv7116_5111
DNA repair and recombination proteins [BR:
riv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Riv7116_5111
Prokaryotic type
Riv7116_5111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFY57508
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Position
6394421..6395869
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AA seq
482 aa
AA seq
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MSDLILFWHRRDLRISDNTGIAAALKKTHKVVGVFCLDPNILKGDDVAAVRVTYMIGCLQ
KLQERYAQMGSQLLILWDNPVVAIAKLAKALNSKAVFWNWDVEPYSQQRDADVIDALQEQ
GIEYLEKNWDQILKTPEEIRTGSDKPYTVYTPFWKNWISKPKDSPVKIADKFEGLTAEEK
EAAIKAGTVELPTAKDLGFHWDGELIIEPGEEAAKDRLEEFCYSNINEYQEQRNFPAIDG
TSRLSAALKFGVIGIRTVWEATEEALENSRSDELENNIRTWQKEIAWREFYQHAMYHFPE
LASGAYRDAFKNFPWEDNDEHFQAWCEGKTGYPIVDAAMRQLNQIGWMHNRCRMIVASFL
TKDLLLNPQLGEKYFMQRLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQAQKFDAEG
EYIRQWVPELSSMDAEYLVTGKITPLERQAVGYPEPIVEHKKQQRAFKEMYKTQKDKIAS
LG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttaattttgttttggcatcgtcgcgatttacggatttctgataatactgga
atagccgcagcattgaaaaaaactcataaggtagtgggtgttttctgtctcgatcccaat
attctcaaaggggacgatgttgcagcggtaagggtaacttatatgattggctgtttgcag
aagctgcaagaaagatatgctcaaatgggtagccaattattaatactttgggacaatccg
gttgtagcaattgcgaagttagcaaaagctttgaattccaaagctgtattttggaattgg
gatgtggaaccatattctcaacagcgagatgcagatgtgattgatgcgctgcaagagcaa
ggtattgaatatttagaaaagaattgggatcaaattctcaaaacaccagaagaaattcgt
acaggttccgataaaccttatacagtttatacacctttttggaaaaattggattagtaaa
cctaaagactctccggtaaaaatagccgataaatttgaaggattaacagcagaagaaaaa
gaagcagcaattaaagccggaacggttgaattacccacagcgaaagatttaggatttcat
tgggatggagaattaattattgaacctggggaagaagcagcaaaagataggttagaagaa
ttttgctatagcaatattaatgaatatcaagaacaaagaaactttcctgcaattgacggt
acatcaaggttaagtgcggctttgaaatttggtgtaattggtattcgtaccgtatgggaa
gccaccgaagaagctttagaaaatagtcgcagcgatgaattagaaaataatatccgtact
tggcaaaaagaaatagcttggagagaattttatcaacacgcaatgtatcacttcccagaa
ttagcatcaggagcttatcgcgatgctttcaagaattttccttgggaagataacgatgaa
cattttcaagcttggtgtgaaggaaaaaccggatatcccatagttgatgcagcaatgcga
caattaaatcaaattggttggatgcacaatcgctgtcggatgattgttgctagttttctt
acaaaagatttgctattaaatcctcaattaggtgaaaaatactttatgcaaagactaatt
gatggggatttatctgctaataatggtggttggcagtggagtgcttctagtggaatggac
cccaaaccagtaaggatttttaatccagcatctcaagcacagaaatttgatgcagaaggt
gaatatattcggcaatgggtaccagaattaagttcaatggatgccgagtatttagtaaca
ggaaaaattacacctttagaacgtcaagctgttggttatccagagccaattgtagaacac
aaaaagcagcaaagagcgtttaaggaaatgtataaaactcaaaaagataaaattgcaagt
ttaggttaa
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