Rivularia sp. PCC 7116: Riv7116_5294
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Entry
Riv7116_5294 CDS
T02364
Name
(GenBank) type I secretion system ABC transporter, HlyB family
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv02010
ABC transporters
riv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Riv7116_5294
03070 Bacterial secretion system
Riv7116_5294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riv02000
]
Riv7116_5294
02044 Secretion system [BR:
riv02044
]
Riv7116_5294
Transporters [BR:
riv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Riv7116_5294
Secretion system [BR:
riv02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Riv7116_5294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
cNMP_binding
Peptidase_C39
AAA_22
DUF87
ABC_ATPase
AAA_29
ABC_membrane_3
AAA_16
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFY57677
UniProt:
K9RKQ2
LinkDB
All DBs
Position
6641241..6644294
Genome browser
AA seq
1017 aa
AA seq
DB search
MTYTTTNIQEFLAGTVPFNQLQPGGMAKLLEKAQLYRYRMGQVILAREKMPAQISILFSG
QVRLLGYEPQTQIPVTLERLQPGAVMGWLETVRGVPGSTAIASTEVICINIDAAEFLALL
GEDENFSAYFYNRAGIVEVFELLSKQLRQQANNQLILQALNCANTKELALKIFDDTQIVS
LTTGSRANQLSPDYHWLVSGGSVSPELVGNRFDADESLPRGSRVRLLGITAEVFSPSDTL
LQNPTEDVQQADITEVIPPGGSSTTYEDIPYAPAEPPEAEYDRGYKSSAAANKYPHVRGS
GSINAILACFHMLSKHLNMPFRKEVIRKVLVNQEKRTGSLSLQQCGAVAQLVGLRPQLIG
VPASALGRIEPPAIVQWQDSFAVLYEVSPKTTVVGVPESGILTQKTSDVAQVLLQSQPQN
EEQQQEAIPVLLLQATEETPQQKFGLSWFLPSLNKYKGVLIEVFIASFFFQLFGLANPLV
TQVIIDKVINQNSPDTLQVLGVFLLVIAVFEAILGTIRTYLFVDTTNRIDLALGSEIIDH
LLRLPLRYFEKRPVGELSTRVNELEKIRSFLTGTALTVVLDAVFSVIYIVVMFIYSWILA
LVALGTLPLFAILTFVVSPIVRRQLRHKAERNAHAQSHLVEILSGIQTVKAQNIELRSRW
QWQERYSRYVSAGFKTVQTSTAAGSTSGFLNKLSGLLVLWVGAYLVLDGKLTLGQLIAFR
IIAGYVTSPLLRLTQLWQNFQETALSLERLSDIIDSPQEATEEDRGNIPMPMIEGAVKYD
NVSFRFKPTGPMQLNNISLEFPAGVFVGVVGQSGSGKSTLMKLLPRLYPLESGRILIDGY
DINKVELYSLRQQVGIVPQDTLLFEGSVQENIALNYPDATPEEIIEAAKIAVAHEFIMDL
PNGYNSRVGERGSALSGGQRQRVAIARTILQNPRLLILDEATSALDYESERQVCLNLAEA
FKGRTVFFITHRLSTIRNADIILMLDKGYVVEQGTHQELMSLKGRYYCLYQQQEAQI
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgacttatacaacaactaatatccaagaatttttagcagggactgttccctttaatcag
ctgcagcccggggggatggcaaagcttttagaaaaagcacaactgtaccgctaccggatg
ggacaggttatcctagcacgggaaaaaatgcccgctcaaatatcaattcttttttccggg
caagtgcgtttactcggttacgaacctcaaactcaaatacctgtaactttagaaagactc
caacccggagcagttatgggttggctagaaacagtacggggtgtacctggttctactgct
atagcttcgacggaagttatttgtattaatattgatgctgcggagtttttggctttatta
ggtgaagatgaaaattttagtgcatatttttataatcgtgcgggaatagttgaagtattt
gaattactgtcgaaacagctgagacagcaagcaaataaccaattaattttacaagcatta
aattgtgctaataccaaagaattagcgctaaagatttttgatgacacacaaattgttagc
ttaactactggctcgcgagctaaccaattaagtcccgattatcactggttagtcagcgga
ggaagcgtttcccccgaattagtcggcaatcgttttgatgcagatgaatctttaccaaga
ggaagccgggttcgtttgttgggaataacagcagaagtgttttcaccatcagacacttta
ttacaaaatcctaccgaagacgtacagcaagcggacataaccgaagtaattccccctggt
ggctcttcaacaacatatgaagatattccctacgcacctgctgagcctcccgaagctgaa
tacgatcgcggatacaagtcttctgctgctgcgaataagtacccccacgtgcgcggaagc
ggttcaataaacgctattctggcttgcttccacatgttgagtaagcatttaaatatgccc
ttccgcaaggaagttattcgtaaagtgttagttaaccaagagaaacgcacgggttcctta
tcgttacagcaatgcggagctgtagcacagttagttggtttgagaccccaattaattggc
gtacccgcaagcgcattaggaagaattgaaccccctgcaattgttcaatggcaagatagt
tttgccgtactttacgaagttagtcctaaaacaacagtagtaggcgtaccagaatcggga
atcctaactcagaaaacttcagatgtcgcgcaggtactgcttcaatcgcaacctcaaaac
gaagaacagcaacaagaggctattcctgtattgctgctgcaagccaccgaagaaacacca
cagcaaaaattcgggttaagttggtttttaccttcgttaaataaatataaaggcgtactc
atagaagtatttatcgcctccttcttcttccagttgtttggtttggcaaaccccctggta
acacaagtaattattgataaagtaattaatcagaacagtccggataccttgcaagttctt
ggtgtatttctattagtgattgcagtttttgaagcaatacttggtactattcggacttac
ttgtttgtagatacgacaaaccgtatcgatttagctttaggttcggaaatcatcgaccac
ttactacgtttaccgttacgttactttgaaaagcgacccgtaggtgaactttccaccagg
gttaacgaattagaaaaaattcgtagctttttaactggtactgctttaacagtggtttta
gatgcggttttctccgttatctacatcgtagtaatgtttatttatagctggatattggct
ttagtcgctttaggtacgctgccattatttgctattcttacctttgtcgtttctcctatt
gtccgccgacagctacggcataaagcagagcgtaatgctcatgcacaatcccacttagtt
gaaattttatcgggtattcagacagttaaagcgcaaaacattgaattacgttcccgttgg
caatggcaagaacgttattctcgttatgttagtgctggcttcaaaacggtacaaacttct
actgctgctggttctactagtggttttctcaacaagctttctggtttacttgtactgtgg
gtaggagcttatctggtattagacggcaaactaactttgggacagctaatcgcttttcgc
atcatagccggttatgtaacttctcctttattacgtcttactcagttgtggcagaacttt
caagaaacagctttatctttagaacgcttgagtgacattatcgactcgcctcaagaagct
actgaagaagacagaggtaacattcccatgccgatgattgaaggagccgtcaaatacgat
aacgtttctttccgtttcaaacctaccggaccaatgcagctaaataacattagcttggaa
tttccagctggggtatttgtcggtgtcgtcggtcaaagtggttccggtaaaagtacattg
atgaaactgctaccgcgtctttatcccttagaatccgggcgcattctcattgatggttac
gacatcaacaaagtagaactttactcactacgacagcaagtaggtattgtgccacaagat
accttactttttgaagggtccgtacaggagaatatcgccttaaactatcccgatgctact
ccagaggagattatcgaagcagccaaaattgcagtagcccatgaatttatcatggatttg
ccgaacggttacaatagtagagtaggcgaacgaggtagcgctttatccggtggacagcgt
caaagagtcgcaattgcccgtacaattttacaaaatccgcgcttattaattcttgatgaa
gctaccagcgctctcgactatgagtccgaacgtcaggtatgcttgaatttagcagaagcc
tttaaaggcagaactgttttctttattacacatagactaagtacaatccgtaatgccgac
attattttaatgttagataaaggttatgttgtagaacagggaacccaccaagaattaatg
tcgcttaaagggcgctactattgcctatatcaacagcaagaagcacaaatttag
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