Rivularia sp. PCC 7116: Riv7116_5366
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Entry
Riv7116_5366 CDS
T02364
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
riv03016
]
Riv7116_5366
Enzymes [BR:
riv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Riv7116_5366
Transfer RNA biogenesis [BR:
riv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Riv7116_5366
Prokaryotic type
Riv7116_5366
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AFY57745
LinkDB
All DBs
Position
complement(6746638..6747585)
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AA seq
315 aa
AA seq
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MQITFLGTSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQILRSDLKMSQLSRIFV
THMHGDHIFGLMGLLASCGLAGNVSRVDIYGPQGLNEYLQACRRYSHTHFSYPVKVHAVR
PGVVYEDSEFRVSCDILHHRITAYGYRVEEKNRAGRFDVEKAKALEIPPGRIYGQLKRGE
SVTLKDGRVINGADLCGPTEIGRKVVYCTDTVFCENAVDLAKDADVLIHEATFAHQDSQM
AFDRLHSTSTMAAQTALAAGAHNLIMSHFSPRYAPGNAIELKDLLNEGRAIFPNTKMAYD
FMTYDVPRRRESVRS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaataacatttttagggacgagttccggggtacctacaaggtcgcgcaatgtttct
agtgttgccctgagattgccgcaaagagcagaattatggttatttgattgtggtgaaggt
acccaacatcaaatattgcggagtgacttaaaaatgagtcaactctcccgaatttttgtt
actcatatgcacggcgatcatatatttggtttgatggggcttcttgctagctgcggttta
gcaggaaatgtcagccgcgttgatatttatggcccgcaaggcttaaacgaatatttgcaa
gcttgcagacgctattctcatacacacttttcttacccggtaaaagttcatgctgttcgt
ccgggagtagtttatgaagattcagaatttagggttagctgcgatattttgcatcatcga
attacagcttatggttatcgtgtggaggaaaaaaacagagccggaagattcgatgttgag
aaagcaaaagccttggaaattcctcccggtagaatatatggtcagctcaaacgtggcgaa
agcgtaactttaaaagatggaagagttattaacggtgctgacttatgcggacctacggaa
atcgggcgcaaagttgtatattgtaccgatacggtattttgtgaaaatgcagtggattta
gccaaagatgctgacgtattaattcacgaagctactttcgcccatcaagattcccagatg
gcttttgacagactgcattcgacatctacaatggctgcacaaacggccttagcagcaggc
gcgcataatttaattatgagtcattttagtccccgttatgctcctggcaatgccattgag
ctaaaagacttacttaacgaaggtagagctattttccctaatacgaagatggcttacgac
tttatgacttacgatgttcccagaagaagggaatcagttcgcagttag
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