Rivularia sp. PCC 7116: Riv7116_5543
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Entry
Riv7116_5543 CDS
T02364
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Riv7116_5543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_5543
Enzymes [BR:
riv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Riv7116_5543
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Riv7116_5543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
MarR_2
DUF7343
MarR
TFA2_Winged_2
Motif
Other DBs
NCBI-ProteinID:
AFY57912
LinkDB
All DBs
Position
complement(6969608..6972178)
Genome browser
AA seq
856 aa
AA seq
DB search
MYTTNAALSTAIAASARVEYSYTIPQHQWVEVLVDCPRMTGLLTYGLPPGLEVQPGDILS
VPLNTQTIGGIAIRKLSQPPKDIPIQKIKNVEDVVSSGFFPDFYWELLNRIARYYYTPLI
QVIRVALPPGLLGKSQRRIQLIAHQNTPQYLSSSSLSFSLSPAARKILDLLQAQQEGNYS
FVYLSRQVRGAYRAVRELRRLGLIETYLEAPRLTKPKLQKAVILIKNSFKQDLTARQTEI
LEVLRRRGGEMWQTELLQACSTSSSVIKTLEKKGYVVVEEKEILRTDAQDNVDETFTGGL
AKNLTSAQQIALETINNINGYASILLHGVTGSGKTEVYLQAIAPLLTAGRSALVLVPEIG
LTPQLTDRFRARFGSKVRVYHSALSDGERYDTWRQMLAGEAQVVIGTRSAIFAPLPNLGL
IVLDEEHDSSFKQDSPIPTYHARKVAAWRAELQNCPLILGSATPSLESWVAAGRRGEGGE
GEEGEELLPNAQFPKSYYLSLPERVNSRPLPPVEIVDMRSELQQGNRSIFSKSLQQGLQE
LVETGQQGILFIHRRGHSTFVSCRSCGYVMECPYCDVSLSYHQTEAGAAQVLRCHYCNYA
TPHPKNCPDCCSPYLKFFGSGTQKVAQELTKQFPDLRFIRFDSDTTRNKGAHRTLLTRFA
KGEAHLLIGTQMLTKGLDLPQVTLVGVVSADGLLHLSDYRASERAFQTLTQVAGRAGRGE
DPGRVIIQTYTTEHPVIEAVRQHDYQTFIADELDQREALNYPPLGRLILLRLSSLDDVQV
ENTAAAIAEKLQQQSEIDVLGPAPASILRVANRYRWQILLKFTAEDLPKLPNWEEIRQLC
RDSVSLTIDIDPLNIM
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaactaacgctgctctatcaactgcgatcgcggcttcagcaagggtcgaatat
agctatacaattccccaacatcaatgggttgaagtattagtagactgtccgagaatgaca
ggattattaacttacggattgcctccggggttagaagtacaacccggagatattttaagc
gtgccattaaatacgcaaactattggtgggatagcgattcgtaaattatcgcagcctccg
aaggatataccaatacaaaagataaaaaatgtagaagatgttgtcagctctggctttttc
cccgatttttactgggaattattgaatagaattgccagatactattacacgcctttaatt
caagtaattcgcgttgctttaccccccggtttgctgggaaaatctcaacggcgaattcag
cttattgctcatcaaaatactccccaatatttatcttcttcttcactgtcattttcgctg
tctccggcagcaagaaaaatactcgacttgcttcaagctcagcaagaaggaaattatagt
tttgtttatctaagccgacaagttcggggtgcttatcgtgcagtcagagaattaagaaga
ttgggattaatcgaaacttatttagaagcgccacgtctaactaagccaaaattacaaaaa
gcagtaatattaatcaaaaatagttttaaacaagatttgaccgctcgtcaaacagaaatt
ttagaagtgttacgccgacgcggtggcgaaatgtggcaaactgaattattacaggcttgc
agcaccagttcctcagttatcaaaaccttagaaaaaaaaggttatgttgtcgtagaagaa
aaagaaatattgcgaactgatgctcaagataatgtagacgaaacatttacaggagggcta
gcaaaaaacctgacatcagcccaacaaatagctttagaaactataaataatattaatgga
tatgcatcaattttattacatggagttacgggatcgggtaaaacagaagtatatttgcag
gcgatcgcacctttattaacagcaggtagatcggcattagtattagttcctgaaattgga
ttaacaccacaactaaccgaccgctttcgtgctagattcggcagtaaagttagggtttat
catagcgctctttccgatggcgaacgttacgatacttggcgacaaatgctagcaggggaa
gcccaagtagtcatcggcacccgtagtgctatttttgcaccactgccaaatctcggttta
atcgtcttagacgaagaacacgattcctcattcaaacaagattcacccattcccacctac
cacgcccgtaaagttgcagcttggcgagcagaattacagaattgccccctaattttaggt
tcggcaactccttctttggaaagctgggtagctgcggggagaagaggagaggggggagaa
ggggaagagggggaagaattattacccaatgcccaattcccaaaatcctactatctctct
ttaccagagcgcgtcaattctcgccctttaccgccagtagaaatagtagatatgcgctcg
gaattacagcagggaaatcgttcaatatttagtaagtctttacagcaaggtttgcaagaa
cttgttgaaaccgggcagcaaggaattttatttattcatcgccggggacacagcactttt
gtatcttgtcgtagctgcggctatgtaatggaatgtccttattgtgatgtgtcgttatcc
tatcaccaaaccgaagccggagcggcacaggttttacgctgtcattattgcaattatgcg
actcctcatcctaaaaattgtccggattgttgctcgccttatctaaaattctttggtagc
ggcactcaaaaggtagcgcaagagttaaccaaacagtttcccgatttgcgctttattcgt
ttcgacagcgacaccacgcgcaacaaaggagcgcatcgcactttattaactagatttgct
aaaggtgaagcgcatttattgattggaacccaaatgctcaccaagggtttagatttaccg
caagtcaccttagtaggggtagttagcgccgatggattgctacatttatccgattaccgt
gccagcgaacgcgctttccagactttaacccaagttgccggacgtgccggtagaggtgaa
gaccccggaagagttataattcaaacttacactacagagcatccagtaatcgaagctgta
cggcaacacgattatcaaacttttattgcagacgaattagatcagcgagaagcattaaat
tacccgccattagggagattaattttattgcgtttgagcagtttagatgacgtacaagta
gaaaacactgccgcagcaatcgctgaaaagctccagcaacaatcggaaatcgatgtatta
gggccagcaccagcaagtatattaagagtagcaaatcgttatcgctggcaaatattatta
aaattcactgccgaagatttaccaaaattaccaaactgggaagaaatacgtcagctttgc
cgggattccgttagtttaacaattgacatcgatcccttaaatatcatgtaa
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