Rivularia sp. PCC 7116: Riv7116_5731
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Entry
Riv7116_5731 CDS
T02364
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
riv03016
]
Riv7116_5731
Enzymes [BR:
riv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Riv7116_5731
Transfer RNA biogenesis [BR:
riv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Riv7116_5731
Prokaryotic type
Riv7116_5731
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AFY58097
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Position
7224139..7225017
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AA seq
292 aa
AA seq
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MLGFLNLDKPFDWTSHDCVAKTRRLLGIKKIGHAGTLDPAATGVLPIAIGKSTRLLQYLP
SNKAYKATIRLGMQTTTDDLQGDVIQQDAISELNLETVARALKQFQGKIEQIPPSYSAIQ
VDGKRLYDLARKGEKVEAPVRSVEIFSIDILEWREGSFPELDVNIACGAGTYIRAIARDL
GAILETGGTLAALQRTVSSGFNLADSITLTELEAKLKTDDFQPMAADAPLKHLSERTLTG
NEPRRWCQGQKISLDEQVSEIVRVYNEQRLFLGIGELKEQLLIPRMVLEAAS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
ttgcttggtttcttaaatctcgataaaccttttgattggacttctcatgattgcgtggca
aagacacgcagactattgggtataaaaaaaataggacatgctggaacattagatcccgca
gctactggtgttttacctatcgctattggtaaatcaactcgattgttgcagtatctccct
agcaataaagcttataaggctactattcggttagggatgcaaactaccactgatgatttg
caaggcgatgtaattcaacaagatgctataagcgagttgaatctggaaactgtcgcaagg
gcgctgaagcagtttcaaggtaaaattgagcagattcctccaagctatagtgcgattcaa
gttgatggcaagcgactttacgatttagcccgtaaaggtgaaaaagttgaagctcccgtg
cggagtgtggaaatatttagtattgatattttagaatggcgagaaggtagcttccccgaa
ttagatgtgaatatagcctgcggtgcgggtacttatattagagcgatcgccagagattta
ggtgcaatattagaaacgggaggaaccttagcagccttacagcgtactgttagcagcggt
tttaatttagcagacagtattactttaactgagttagaagctaagctgaaaaccgatgac
tttcaaccaatggctgctgatgcacctttaaagcatctttctgagagaactttaactgga
aacgagccacgtagatggtgtcagggacagaaaatttccctggatgagcaagtatcggag
atagtaagagtctacaacgagcaaaggctctttttaggtattggagaattaaaagagcaa
ctattgattccacgaatggttttggaagccgcttcttga
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