Rivularia sp. PCC 7116: Riv7116_6385
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Entry
Riv7116_6385 CDS
T02364
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03030
DNA replication
riv03430
Mismatch repair
riv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Riv7116_6385
03430 Mismatch repair
Riv7116_6385
03440 Homologous recombination
Riv7116_6385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riv03032
]
Riv7116_6385
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_6385
Enzymes [BR:
riv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Riv7116_6385
DNA replication proteins [BR:
riv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Riv7116_6385
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Riv7116_6385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
DUF655
Intein_splicing
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
AFY58726
UniProt:
K9RMG5
LinkDB
All DBs
Position
complement(8088738..8090105)
Genome browser
AA seq
455 aa
AA seq
DB search
MVKIISRKVLKTENVYDIGLEGDHNFIIKDGLIASNCFNKSHSTAYGYVTYQTAYLKANY
PLEYMAALLTANSGDKDKVQKYIATCLNMGIQIESPDINSSEVDFTPANDKILFGLSAIR
NVGENARNCVLEAREEGAFTSLADFCDRVDLGTVNRRALQSLIYCGAFDKINDNRNQLIE
DLEFVYDWAQSRARDRASGQGNLFDLLGGAWSGGANTSNMPGNVILSPPKAKEVPDFPPQ
EKLRMEKELLGFYVSDHPLKSIGKSMQILSPINMTQLKNQREEAKVCVVVMLNNVKKVIT
KKGDPMAILQIEDLTTAGEAVVFPKTYDRINEILLVDAKLIIWGKVDKKDDQSQLIVDDA
EPVENIELIVIEMTPQQATTIEEHHRLRTVLKDLKEKSGEKEKGKIPVIGIIQAENSRQL
VRFGRQYWVQDSRSAIMALHNGRFNARIQPLSATT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaatcatatctcgaaaagtgctaaaaactgagaatgtatatgatattgggctt
gagggcgaccataattttataattaaggatggtttgattgcttctaactgtttcaataag
tctcactcaacagcttatggttatgtgacatatcaaaccgcttatttgaaagctaattat
cctttagagtacatggcagcgctgttgacagctaacagtggtgataaggataaggtgcaa
aaatatattgcaacctgtttgaatatgggtattcagatagaatcacccgatattaactct
tcggaagttgattttactcctgcaaacgacaaaatcttgtttggattgtcagcaatacgt
aatgtgggagaaaatgcgagaaactgtgttttagaagctagagaagaaggggcttttaca
tcccttgctgatttttgcgatcgcgttgatttgggtacggtaaatcgtcgagctttacag
tctttgatatattgcggagcttttgacaaaattaatgataaccgcaatcagctaattgaa
gatttagagtttgtatacgattgggcacagtctcgcgctagagacagagcaagcggacaa
ggtaatttatttgatttattaggtggtgcttggagtggaggggcaaatacaagtaatatg
cctggaaatgtcatattaagtcctccaaaagcaaaggaagttcctgattttcctcctcaa
gaaaagctgcgaatggagaaagaacttttaggtttttatgtgtcggatcatcccctcaaa
tcgataggtaaatcgatgcaaattctctctcctataaatatgacgcagttgaaaaatcaa
cgagaggaagcaaaagtttgtgtggttgtcatgcttaataacgtcaaaaaggtgataact
aaaaagggcgatccaatggcaatattacagatagaagatttgactacagcaggggaagct
gtagtgtttcccaagacttacgaccgaattaatgaaattttactagtagatgcgaagcta
attatctggggaaaagttgataagaaagatgaccagtctcaattaattgttgacgatgct
gaaccagttgaaaacattgaattaatagttatagaaatgactcctcaacaagcaactact
attgaggaacatcatcgtttaagaacagttttaaaagatttaaaagaaaaatcaggtgaa
aaagaaaaaggcaaaatacctgttattggaattattcaggctgaaaattctcgccaacta
gttcgttttggcagacaatactgggtacaagattctagaagcgcaattatggctttgcat
aatggtagatttaatgcccgaattcaacctttgagtgcgacaacttaa
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