Roseburia intestinalis XB6B4: RO1_00860
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Entry
RO1_00860 CDS
T02597
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00450
Selenocompound metabolism
rix00970
Aminoacyl-tRNA biosynthesis
rix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RO1_00860
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RO1_00860
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rix01007
]
RO1_00860
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rix03016
]
RO1_00860
Enzymes [BR:
rix01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
RO1_00860
Amino acid related enzymes [BR:
rix01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RO1_00860
Transfer RNA biogenesis [BR:
rix03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RO1_00860
Prokaryotic type
Other AARSs
RO1_00860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
tRNA-synt_1e
tRNA-synt_1f
Anticodon_3
Anticodon_1
tRNA-synt_1b
DUF1272
DALR_2
HVO_0758
NikA-like
Motif
Other DBs
NCBI-ProteinID:
CBL10918
UniProt:
D4KU78
LinkDB
All DBs
Position
72408..74405
Genome browser
AA seq
665 aa
AA seq
DB search
MSSKGKFYMTTAIAYTSGKPHIGNTYEIVLADAIARFRRQEGYDVYFQTGTDEHGQKIQE
KAEKAGITPKEYVDNVAGEVKRIWDLMNTSYDNFVRTTDEDHEKQVKKIFKKLYDKGDIY
KGSYEGLYCTPCESFWTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADKLINYINEHP
EFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFSWGIPVDFDPKHVVYVWLDALTNYITKIG
YDADGNSSDLFNKNWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQVFGHPWLLQGGE
KMSKSKGNVIYADDMADLFGVDATRYFVLHEMPFENDGIITWDLVIERYNSDLANILGNL
VNRTISMSNKYFDGVVKSTGVTEEVDADLKAVVTSARDKVAEKMKNLRVADAITEVFNLF
RRCNKYIDETAPWVLAKDEAAKDRLAEVLYNLVESITIGACLLKSFLPETADRILAQLNA
GMREYDNLDKFGLYENGNKVTDKPEILFARLDAKEIMPKIDAIREAQKAEFEAEQKALGE
LPETTEESGEAIDIEAKPEIEYDDFMKMQFQVGEIISCEAVPKSKKLLCSQVKIGSQVKQ
IVSGIRKYYTPEEMVGKKVMVLVNLKPAKLAGVLSEGMLLCAEDAEGNLALMTPEKAMPS
GAEIC
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaaggaaaattttatatgacaacagcgattgcctacacatccggcaagccg
cacattggaaatacctacgagatcgtacttgcagatgcgatcgcaagattccgccgtcag
gaaggttatgatgtttacttccagaccggaacggacgaacatggtcagaagatccaggag
aaggccgagaaggccgggatcactccgaaagagtatgtggacaatgtagccggagaggta
aaacgcatctgggatctgatgaacacttcctatgataattttgtccgtacaaccgatgaa
gaccatgagaaacaggtaaaaaagatcttcaaaaaattatacgataaaggtgacatctac
aaaggttcctacgagggactttactgtactccgtgtgaatctttctggacagagtcacag
cttgtggatggaaaatgcccggactgcggacgtgaggtccagccggcaaaagaggaggca
tatttctttaaaatgagcaaatatgctgacaaactcatcaactacatcaatgagcatccg
gaatttatccagccggtttccagaaaaaatgagatgatgaacaacttcttacttccggga
ttacaggatctgtgcgtttccagaacatcattttcctggggcattccggtagatttcgat
ccgaaacatgtcgtttatgtgtggctggacgctctgaccaactatatcaccaagattgga
tacgatgcagacggcaattccagtgatctgttcaacaagaactggcctgcagacttacat
ctgatcggaaaagacatcatccgtttccatacgatctactggccgatctttttgatggca
ctggatctgccgctgccaaaacaggtgtttggtcatccgtggcttttacagggcggcgag
aagatgagcaagtctaaaggaaacgtgatctacgcagatgatatggctgatttattcggc
gtggatgcaacacgttactttgtattacacgagatgccgtttgaaaatgacggaatcatt
acctgggatcttgtcatcgagcgttacaactctgaccttgctaatatccttggaaacctt
gtaaaccgtaccatttccatgagcaataaatattttgacggtgtggtaaagagcacaggt
gtgacagaggaagttgatgcagacttaaaggcagttgtgacatctgcgagagataaagtt
gcagagaagatgaaaaatctgcgtgttgcagatgcaatcacagaggtatttaacttattc
cgccgctgcaacaaatacattgatgagactgcaccgtgggtacttgcaaaggacgaggca
gcaaaagaccggctggcagaagtactttataatctggtagagtccatcacgatcggagca
tgtctgttaaagagcttcttaccggagacagcagaccgtatcttagcgcagctgaatgca
ggtatgcgtgaatatgataatctggacaaattcggactttatgagaatggaaataaagtg
acagacaaaccggagatcctttttgcacgtctggatgcaaaagagatcatgccaaagatc
gatgcgatccgtgaagcacagaaagcagagtttgaggcagagcagaaggcacttggcgag
ttgccggagactacagaggaatcaggcgaagcaatcgatatcgaggcaaaaccggagatc
gaatatgatgattttatgaaaatgcagttccaggtcggagagatcatttcctgtgaagca
gtgccgaagtcaaagaaattattatgttcccaggtaaaaatcggaagtcaggtaaaacag
atcgtttccggtatccgcaaatactacacaccggaagagatggtcggcaaaaaagtaatg
gtacttgtgaacttaaaacctgcaaaacttgccggagttttatctgagggaatgctctta
tgtgcagaagatgcagagggtaatcttgcactgatgacaccggaaaaagcaatgccgagc
ggagctgagatctgctag
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