Roseburia intestinalis XB6B4: RO1_01230
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Entry
RO1_01230 CDS
T02597
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03030
DNA replication
rix03430
Mismatch repair
rix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RO1_01230
03430 Mismatch repair
RO1_01230
03440 Homologous recombination
RO1_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rix03032
]
RO1_01230
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_01230
Enzymes [BR:
rix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RO1_01230
DNA replication proteins [BR:
rix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RO1_01230
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RO1_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
TIP49
RuvB_N
AAA_22
AAA_30
ResIII
AAA_14
AAA_18
AAA_assoc_2
AAA_19
RCF1-5-like_lid
DnaX_C
AAA_7
AAA_lid_RFC1
AAA_16
Rad17
Mg_chelatase
PIF1
TsaE
DUF815
AAA_2
Viral_helicase1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CBL10950
UniProt:
D4KUB0
LinkDB
All DBs
Position
113550..115130
Genome browser
AA seq
526 aa
AA seq
DB search
MSYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKIFAK
AVNCEHPVDGSPCGECPACKAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTEGKY
KVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRISI
ETISARLMELMEKEQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFYLGQDLTYDKVLE
TLGAVDTEIFSRLLRQILEKNVTGAIGVIDEMVIEGRELGQFVNDFTWYLRNLMLVQSSD
DMEDVLDISTENLALLKEEAQMVDTDILMRYIRIFSELSNQIRYAVQKRILIEIAVIKLC
KPEMEKDYGSLIDRVDSLEKKLEKGIVVTQASGDMAAGTTGSSAASAVLKKKELPKAIPE
DIKQIMSSWSGILSQLTGITRTYLKKAVPTLGEGGTLILAFEDANAYTYIEENRSNCQDE
LRAAVAERLGKEVEILVKLNDTGTPSGEIYPDLRQLINFEIEEDDF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacacagcattatatcgtaagttccgtccacaggagtttgaggacgtcaaagga
caggaacacattgttacaacattaaaaaaccagatcaaagcagacaggatcgggcatgcg
tatctgttttgtggaaccaggggaaccggtaagacgaccatcgcaaagatatttgcaaag
gcggtcaactgtgagcatcctgtagacggcagcccgtgtggagagtgcccggcctgcaag
gcgattgcagcgggcaactccatgaatgtgatcgagatcgatgccgcatcgaataacggt
gtggataacatccgccagatccgtgaggaggtggaataccgtccgacggaaggcaaatac
aaagtctacattatcgatgaggttcatatgctttccataggtgcatttaatgcactgcta
aagacactcgaggagccgccatcatatgttatttttattctggcaacaacggaggcacac
aagataccgatcacaatcttatcccgctgtcagagatacgatttcaggcgtatttccatt
gaaacgatctcagcgagactgatggagctgatggaaaaggagcaggtcacagtggaggaa
cgtgcgatccgctatatcgcaaaggcggcggacggttccatgcgggatgcactcagtctg
ttagaccagtgtattgcgttttatcttgggcaggatcttacttacgacaaagtacttgaa
acactcggtgcggttgatactgagattttcagcagactgctccgtcagattttagagaaa
aatgtgaccggtgcaatcggtgtgatcgatgagatggtcattgagggcagggaattagga
cagtttgtcaatgattttacctggtatctgaggaatctcatgcttgtacagagctcggat
gacatggaggatgtgcttgacatttcaacggagaatcttgccctgttaaaagaagaggcg
cagatggtagacacagacattcttatgcgctatatccgtattttttcagaactgagtaat
cagatccgttatgccgtacagaagcgtatactgatcgagattgcggtgatcaaattatgt
aaaccggagatggaaaaagattatggttcgctgatcgaccgcgtggacagtctcgaaaaa
aagctggagaagggtattgtggtaacgcaggcatccggtgacatggctgcggggacaaca
ggttcttctgccgcatcggcggtgttaaaaaaaaaggaacttcccaaggcaatccctgaa
gatatcaaacagatcatgagcagctggagcggcattttatcacagctgacagggatcaca
agaacctatctcaaaaaagcagttccgacattaggagagggcggtacgctgatcctggca
tttgaggatgccaatgcgtacacttatatagaagagaaccgttccaactgccaggatgaa
ttacgggcagcagttgcagaaagacttggcaaagaggtagagattctggtaaaattaaat
gacactggcacgccaagcggggagatctatcccgatttacgccagttgattaattttgaa
atagaagaagacgatttttag
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