Roseburia intestinalis XB6B4: RO1_03310
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Entry
RO1_03310 CDS
T02597
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RO1_03310
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Gene cluster
GFIT
Motif
Pfam:
DUF4368
Recombinase
Resolvase
Zn_ribbon_recom
AAT
FERM_M
CHIP_TPR_N
Motif
Other DBs
NCBI-ProteinID:
CBL11119
UniProt:
D4KUS9
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Position
314018..315595
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AA seq
525 aa
AA seq
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MRLSRDDENYGDSVSIETQRTILQQYAKEQGLHVVGEYVDDGWSGTNFERPDFQRMMDDV
EAGKVNCIVTKDLSRFGREHVMMDYYLEFLFPEKRVRYIAVAENEDTEKGLSDFVPFKNL
FNEWFAKDTSRKVKAAFKAKFATGQRIGAYAPIGYRKHPEIKNKLIIDEETRWIVEKIFD
LAIHGRGAASITRILIEEKVPTPGFINFQRDGTFANIYAGAPEEKSYAWTIAQVKSIMKD
ETYIGHTIHYRETNISFKNKRRVRKPQSEWVRVENTQEPIISEQVFRQVQEQIANRRRKC
KDGTTQIFSGLVKCADCGWSLSYGENRQNSKPYGHYHCSKYGQGTRQCSMHYIRYDVLYA
YVLSRLQYWSGLVQHDEERLLKRLLNATDKGQAAARKKQAAELKKAEKRKAEVDTLFARM
YEDWAAGRITEYNFSMLSGKYQSEQAELDTKIEQLQSAIATESQNAADAEKWIALMKECV
NPTELTAELLNTLIEKIVVHEAVKGEDGSREQEVEIFYRFIGKID
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagattgagccgggacgatgaaaactatggtgacagcgtaagcattgaaacacagcgg
acaatcctgcaacagtacgcaaaggaacaggggcttcatgtagtcggtgagtatgtggac
gatggctggtcggggacgaactttgaacgcccggattttcagcgcatgatggacgatgtg
gaagccggaaaagtaaactgcattgtcacgaaagacctttcccgtttcgggcgggaacat
gtgatgatggactactatctggaatttctgttcccggaaaaacgggtgcgctacatcgcc
gttgcggagaatgaggacacagaaaaagggctttccgattttgtcccattcaaaaacctg
ttcaatgaatggtttgcgaaagatacgagccgcaaggtaaaggccgctttcaaagcgaag
tttgccacaggacagcgtatcggcgcctatgctcctatcgggtacaggaaacacccggaa
atcaaaaacaagctgataatcgacgaggaaacccgctggatagtggagaagatttttgac
cttgctattcatggcagaggggcggccagtatcacaagaatactgattgaggaaaaggtt
cctacgccgggatttatcaactttcagcgtgacgggacttttgcaaacatctatgcgggt
gcgccggaggaaaaaagctacgcatggacgatagcccaggtcaagagcattatgaaagat
gaaacctatatcggccataccatccactaccgggaaacgaacatttcctttaagaacaaa
cggagggtacgcaagccccaaagtgaatgggtgcgggtggagaacacgcaggagccgatt
atcagtgagcaggttttccggcaggtacaggagcagatagcaaaccgccgcagaaaatgc
aaggacggtacaacacagattttttccggattggtaaaatgtgcggattgcggctggtcg
ctgtcctatggggagaacaggcagaacagcaagccttacggccattatcattgtagcaag
tacggacagggcacacgccaatgctccatgcactatatccgctatgatgtgctttacgcc
tatgtcctctcccgtctgcaatactggtcggggctggtacagcatgatgaagaacggctt
ttgaagcggctgttaaatgccactgataagggacaggccgccgcaagaaagaagcaggcc
gccgaactgaaaaaggcagagaagcggaaagccgaagtcgataccctgtttgcccggatg
tatgaggactgggcggcggggcgtatcacggaatacaacttctctatgttgtccgggaag
taccaaagcgaacaggctgaactggacacaaagattgaacagcttcaatccgctatcgcc
actgaaagccagaacgccgcagacgcagaaaaatggattgccttgatgaaagagtgcgtc
aatccaacagaactgaccgccgaacttttgaatacgctgattgaaaaaatcgttgtccat
gaagcggtcaaaggtgaggacggaagccgggaacaggaggtagaaatcttctaccgcttt
atcggcaaaattgattga
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