Roseburia intestinalis XB6B4: RO1_05580
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Entry
RO1_05580 CDS
T02597
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RO1_05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_05580
Enzymes [BR:
rix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RO1_05580
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RO1_05580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CBL11307
UniProt:
D4KVB7
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All DBs
Position
548319..549158
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AA seq
279 aa
AA seq
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MRIDMLIGNHLSASKGYAAMGKAALALDANTFAFFTRNPRGGKAKEIDEKDVEKFLNFAK
EHEFGKIVAHAPYTMNLCAAKEDVRSFSKEMLLDDLKRMEYTPYNYYNFHPGSHVGQGAE
KGIVLIAEALNEALKPEQTTTVLLETMAGKGTEVGRTFEELREILDRVELNDKMGVCLDT
CHVWDGGYDIVNDLDGVLNEFDRVIGLDRLKAVHFNDSMNDCGSHKDRHAKIGEGKIGAE
AMRRVALHPLLEGRPFILETPNDDEGYRREIQMVREWTR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgatatgttaataggaaatcatttatccgcatccaaaggatatgcggcgatg
ggaaaggcagcgctggcgttagatgccaatacctttgctttttttacaagaaatccgcgt
ggcggtaaggcaaaagaaatcgatgaaaaagatgtggaaaagtttttaaattttgcgaag
gagcacgaatttggaaagattgttgcgcatgcgccatatacgatgaacctctgcgctgca
aaagaggatgtccgttctttttcaaaggaaatgctgcttgatgacttaaaacgcatggag
tatacaccgtacaattattataattttcatccgggttcccatgtgggacaaggggcggaa
aaagggatcgtattgattgcggaagcattaaatgaagccttgaaaccggagcagacaacg
accgttttacttgagacgatggcgggaaaaggaactgaggttggaagaacgtttgaggaa
ttaagagaaatcttagaccgtgtggaattaaacgataaaatgggagtctgcctcgatacc
tgccatgtgtgggatggcggttatgacattgtaaacgaccttgacggtgtgttaaatgag
tttgaccgtgtgatcgggctcgaccggctgaaggcagttcactttaatgacagcatgaac
gactgtggctcccacaaggaccgtcatgcgaagatcggtgagggaaagatcggtgcagag
gcgatgcggcgcgttgcattgcacccgcttttagaaggaagaccgtttatcttagagaca
ccgaacgatgatgaggggtacagacgggagatacagatggtccgggagtggacgcggtaa
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