Roseburia intestinalis XB6B4: RO1_06230
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Entry
RO1_06230 CDS
T02597
Name
(GenBank) Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rix03000
]
RO1_06230
Transcription factors [BR:
rix03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RO1_06230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Fe_dep_repress
HTH_50
HTH_11
HTH_36
HTH_41
HTH_24
DUF3134
Motif
Other DBs
NCBI-ProteinID:
CBL11364
UniProt:
D4KVH4
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Position
617764..619254
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AA seq
496 aa
AA seq
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MIEIMIDLQGGAKAPLYEKIYEYIKRDVIEGKIPVGEKLPSTRLLAKHLSVSRSTVEMAY
EQLLAEGYIKAEPCRGFFVCDITELYEFGHIEKDFKHTFTFGKKEQEETACSHVIDFSPY
AIDTMHFPYNVWRKLNKNALLDDREELLLSGDGQGDYGLRKAIAAYLHQARGVNCQPDQL
IIGAGNEYLEILLTQILGRNKRVLMENPTYLQAYHTFLNMGYQMTLVSVEEDGIDPQKVR
NYDPDVVYIMPSHQFPLGTVMPLKQRLELLKWALEKEERYLIEDDHDSEYRYRGKPIPSL
QSVDHFEKVIYIGTFSKSIAPSLRISYMVLPPELLKRYHEKCGFYSTTVPKIQQEILRAF
IEEGHFERHLNKMRGIYRAKHDFLLAELKKRSWVEKIYGDHAGLHVLVQVNTEKKETEIC
DLAEKQGIRIYGISEYVVRKTEQSCNETVRNKNASIESEKNNFAGTVPHKPILLLGYGRL
GEDEIQKGLLILDTII
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaataatgattgatttacaggggggagcgaaagctcccctctatgaaaaaata
tacgaatatatcaaacgggatgtcattgagggaaaaattcctgttggggaaaagcttccg
tcgacaagacttttggcaaagcatttgtcggtaagcagaagtaccgttgaaatggcatat
gaacagctccttgcagagggatacatcaaagcagaaccttgcagggggttttttgtgtgt
gatattacagagctgtatgagtttgggcatatagaaaaagatttcaaacatacatttaca
tttggaaaaaaagagcaggaagagacagcttgcagccatgttattgatttttccccatat
gcaatcgataccatgcatttcccatataatgtgtggagaaaattaaacaaaaatgcactg
ttagatgacagggaagaattgctgttatccggggatggacagggggactatgggcttcga
aaggcgattgcagcatatctgcatcaggcgcgaggtgtgaactgtcagcccgatcagctg
atcatcggagcaggaaatgaatatcttgagattttactgacacagattttaggaagaaat
aagcgggttctcatggaaaatccaacttatttgcaggcatatcatacatttttaaatatg
ggatatcagatgacgcttgtttcggtggaagaagatggaatagatccacaaaaggtcaga
aattatgatccggatgttgtctatatcatgccttcccatcagttccctcttggaacggtc
atgccgttaaaacaaaggctggaattgttgaaatgggcattggagaaagaggaacgctat
ctgatcgaggacgatcacgacagtgagtaccgttaccgtggaaagccgatcccgtcgctg
caaagcgtggatcattttgaaaaagtgatttatattggaactttttctaagagcattgcg
ccgtcacttcgaatcagttatatggtgcttccaccggaattgttaaaacgttatcatgaa
aaatgtggattttattctacgaccgttcccaaaattcagcaggagatactgcgtgccttt
attgaagagggacattttgaacgccatttgaataagatgagggggatctaccgtgcaaaa
catgatttcctgcttgcagagttaaaaaagagaagctgggtagaaaaaatttacggagat
catgcaggactgcatgttttagtacaggtaaacactgaaaaaaaagaaacagagatatgt
gatctggcggaaaaacaaggaatccgtatctatggaatcagtgaatatgttgtacggaaa
acggagcagagctgtaatgaaactgtgagaaataaaaatgcttccatagaaagtgaaaaa
aacaattttgccggaactgtaccgcataaaccgattcttttacttggctatggaagactg
ggtgaagatgagatccagaaaggtcttttgatattagatactattatatga
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