Roseburia intestinalis XB6B4: RO1_08010
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Entry
RO1_08010 CDS
T02597
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_08010
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RO1_08010
Archaeal homologous recombinant proteins
RO1_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CBL11501
UniProt:
D4KVW1
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All DBs
Position
809924..811123
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AA seq
399 aa
AA seq
DB search
MKFLHISDLHIGKRVNEFSMIEDQKYILRQIKEIALEKQVDAVMIAGDIYDKPVPSAEAV
QLFDQFLTGLADCGKKVFAVSGNHDSAERIAFGAQLMSSREVYVSPVYDGEVRCVTCQDA
YGELCIWLLPFIRPAVVRHAWRKVTEGISIGKKDAGTKQDLAQEDDVETVETYQDALQFV
VSHMPVDASKRNILVAHQFVTGASRCESEEVSVGGLDQIGAEVFDVFDYVALGHIHSPQH
IERETLRYCGTPLKYSFSEAEQKKSVVVMEIKEKGDIFIEKVPLKPLRDLRKIRGTYMEL
MSKDFYEGTETDDYLQITLTDEEDVPDGMAKLRTIYPNLMQLVYDNSRTRQSRQVEVTEH
VEQKSEMELFEEFYEIQNNQPMSEEQQDFVRELMEELVH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcttcatatctcggatttgcatattggaaaaagagtcaatgagttttctatg
atcgaagatcagaaatatattttacggcagatcaaagagatcgcattggaaaaacaggtg
gatgcggttatgatcgcgggggatatctatgataagccggttccgtctgcggaggcggta
cagttgtttgatcagtttctcacgggacttgctgattgcgggaaaaaggtgtttgcagtc
agtggaaatcatgattccgcggaacgtattgcatttggtgcacagcttatgagcagccgg
gaagtctatgtttcaccggtttatgatggagaggtgaggtgtgttacatgtcaggatgca
tatggggaactctgcatctggctgctgccgtttatccgcccggcggtcgtgcgccatgcg
tggaggaaagtgacagaggggatatccattggaaaaaaagatgccgggacaaaacaggat
ctggcacaggaagatgatgtggagacagtggaaacatatcaggatgccctgcagtttgtc
gtatctcatatgccggtggacgcatcaaagcggaatatattggtggcacatcagtttgtg
acaggggcttcgcgatgtgagtcggaggaagtttcggtgggtggattagaccagatcggg
gcggaagtgtttgatgtttttgattatgttgcattagggcacattcacagtccacagcat
atcgagagggagacactgcgctattgcgggactccgctcaaatactctttttccgaagcg
gaacagaaaaagtctgttgttgtcatggagataaaggaaaagggagatatcttcattgaa
aaagttccgttaaaaccgcttcgtgatctgagaaagatccggggaacatacatggaactg
atgtcgaaagatttttatgagggcacagaaacagacgattatctgcagatcacactgacc
gatgaggaggatgtgccggatggaatggcaaagcttcggacgatatacccgaatctgatg
cagcttgtctatgataacagcaggaccagacagagcaggcaggttgaggtgaccgaacat
gtggagcaaaaatcagagatggaactgtttgaagaattttacgagatacagaataatcag
ccgatgagtgaagaacagcaggattttgtcagagaactgatggaagaactggtgcattga
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