Roseburia intestinalis XB6B4: RO1_08020
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Entry
RO1_08020 CDS
T02597
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_08020
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RO1_08020
Archaeal homologous recombinant proteins
RO1_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBL11502
UniProt:
D4KVW2
LinkDB
All DBs
Position
811234..815151
Genome browser
AA seq
1305 aa
AA seq
DB search
MKPVSLTISAFGPYAGEQTIDFERLGSQGLFLITGDTGAGKTTIFDAITFALYGEASGDV
RKADMFRSKYAKDDVKTFVRLTFEYANKRYTVERNPEYMRPKGRGTGMTTEKANATLEYP
DDREPVTKSREVTRAITELIGLDCRQFTQIAMIAQGDFQKVLFANTEERGKIFRQIFGTD
IYRVLQDKLKDAVKKQWKEYDELRRSINQYMEGIVCESDSLDEEGTRIAEKINLLKKEKF
DGRIEEGISLLEELCKAEESALECLQKKKEALDQQIKNMDELSGKVRENADRRRLLEEKQ
QKLKDLEALLVQAKADMDRAGEEAECCEKLGRTIEEYKQKLVLFEKIQEIGLSQEKKHQD
MEEKVQKKQQDEQRRTELEGKLQQEKETLKSYEGITAEIQRIEHEMRLITEKMDTLKNQR
DRSRALEEHISDQKEKLDLKKKTENSLLEQQQLLKEEQEQNKDAAGQEIAYEKEVKEIRQ
KIQDLTEIAEQLNTSEREVKRLGTELENVQKSYEVKSRDLQQQKETWEQLSGADSRGEQA
EKAILEVSERIRRLEELENRLEDWEKVSREREKTQKQYQKAAAEQKQISEQYRRIEQQFW
DAQAGMLAQGLKEDEPCPVCGAIHHPTLAVIPQETPDREVLKQAKAEDEKARESVSRLSE
KAHQLVTQENEKMSAVLKDAGELLGEPDVRMSLNEIKTETKRQKSADEARREEYKDQKEK
AKKDLDVKHVLEEQMQSAQDELVMLNEQNINLGQMLATATERCTQQKQQWKKNVADCGTG
IEQTEDQKTVFAQLMQIENERNTQFLQAKNNRKRAEQIKDELKESEETIQKIRGTISSIQ
EEIAKLTGNRETAEKQISDDIKSACNLITGALIASNIITSNIITCNIITCNQSTLTGDTD
VNTLQTIKNADGSQVLSIEDFDAKPYHVQSVITMLQRAADEKKAELSKKQEDERKKTALE
KKIPLDETEIKTLADQINVAEQELVRLQTEYANEEKNLNELKEQVKDVTKEGVQTQINEF
TLKKRNLEENREKTREAYHNYEKNRETEKGVIQMLLRQIEETEKAISFPEEEIEKQAGEL
RAKRNEMEENRASKYTSYCTNREICKNVSKKQKEIAQTEQKYVWMKSLSDTASGMLNGKA
KIELETYVQMAYFDRILIRANRRMLTMSSGQYELKREEETGSRKEKAGLELCVIDHYNGT
KRSVKTLSGGESFQASLSLALGLSDEIQSYAGGIRMDSMFVDEGFGSLDEDALEQALKAL
LQLTEGNRLVGIISHVSELKDQIDKKIIVTKQRTPEGVSSVARVE
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagtcagtcttacaataagtgcatttggcccgtatgcgggggagcagaccata
gattttgaacggcttggatcgcagggattatttctgatcacaggggataccggggcagga
aagaccacgatctttgatgcaatcacgtttgcgctgtacggggaagccagtggtgatgtg
cgcaaagcggatatgttccgcagcaaatatgcaaaagatgacgtgaaaacattcgtgcgt
ctgacatttgagtacgcaaataaacggtatacagtagagcgtaacccggaatatatgcgt
ccgaagggacgtgggacgggaatgacaacggaaaaggcaaatgccacactagaatacccg
gatgacagagaaccagtgacaaaaagcagagaggtcacacgcgccatcacagagctgatc
ggtttagactgcagacagtttacccagatagcaatgatcgcacagggggattttcagaaa
gtattgtttgccaatacggaggagagaggaaagatttttcgtcagatattcgggacggat
atttatcgtgtgctgcaggacaaactgaaagatgccgtaaaaaaacaatggaaagaatat
gatgaactgcggcgcagcatcaatcagtatatggagggaattgtctgtgagagtgactct
ctggatgaagaagggacaaggatcgcagaaaaaataaatcttttaaaaaaggaaaaattt
gacggcaggatcgaggagggaatctcacttttagaagaactttgtaaagcggaagaatct
gcgttggagtgcctgcaaaagaaaaaagaggcgctggatcagcagataaaaaatatggat
gaacttagcgggaaagtgcgtgaaaatgcagacagaaggcggttgttggaagaaaaacag
cagaagctgaaggacttagaagcgcttctggtgcaggcaaaagcggatatggacagggca
ggagaggaagcggaatgctgtgaaaaattaggcagaacgattgaagaatataaacagaag
ctggtgttgtttgaaaaaatacaggaaattggtctgtcgcaggaaaagaagcaccaggat
atggaagaaaaagttcagaaaaagcagcaggatgaacagagacgaacagaactggaggga
aaactgcagcaggaaaaagagaccttaaaatcttatgagggcattactgcggaaatacaa
cgcatagagcatgaaatgcgactgatcacagaaaaaatggatacgctgaaaaatcagaga
gacaggagccgtgcgctggaggagcatatttcagatcaaaaggaaaaacttgatttaaaa
aagaaaacagaaaacagtcttttagaacagcagcaactgttaaaagaagaacaggagcag
aacaaggatgcggcaggacaggagattgcctatgagaaggaagtaaaagaaatccgacag
aaaatacaggatctgacagagattgcagaacagttgaacacatcagaaagagaagtaaag
agacttggtacagaactggaaaacgtacagaaatcatatgaggtaaaaagcagggattta
cagcagcaaaaagaaacgtgggagcagctttccggtgcagacagcaggggagaacaggca
gagaaagcaatattggaagtatcagagaggatacgcaggctcgaagagctggaaaacagg
ttagaggattgggagaaagtcagcagagaaagggagaaaactcaaaaacagtatcagaaa
gcagccgcagagcagaaacagatcagtgaacaataccggaggatagaacagcaattctgg
gatgcacaggcgggaatgctggcgcagggattaaaggaagacgaaccctgtccggtctgt
ggagccatacatcatccgacactggcagtcataccacaggaaactccggatcgggaagtg
ttaaaacaggcaaaagcggaggatgaaaaggcaagggagtcagtcagcagactgagtgaa
aaagcgcatcagctcgtgacacaggaaaatgagaaaatgtcagcagtcctaaaggatgca
ggagaactgcttggtgagcctgatgtcagaatgtctttaaatgaaataaagacggagaca
aaaaggcaaaagagtgctgatgaggcgagaagggaagaatataaagatcagaaagaaaaa
gcgaaaaaggatctggatgtcaagcatgtattagaagaacagatgcagtctgcgcaggat
gaactggttatgttaaacgaacagaacattaatcttggacagatgcttgccacggcgaca
gaacggtgcacacagcagaaacagcagtggaagaaaaacgttgcagactgtggaactggc
atagagcagacagaggatcaaaaaactgtttttgcacagcttatgcagattgaaaacgaa
cggaacacgcagtttttacaggcaaaaaataacaggaaacgtgcagagcagatcaaagat
gaattaaaagaaagcgaagaaacaatacaaaagataagaggaacaatcagcagtattcag
gaagaaattgcaaaattgaccggaaacagggaaactgccgaaaagcagatcagtgacgat
ataaaatctgcatgtaatttaattacgggtgctctgattgcaagtaatataattacaagt
aatataattacatgtaatataattacatgtaatcagagcactttaactggagatacagat
gtcaatacattacagaccataaaaaacgctgatgggagtcaggttttgtcaatagaagat
tttgatgcaaaaccataccatgtacagtctgtgattactatgctgcaaagagcagccgat
gagaaaaaagcggaactttccaaaaaacaggaagacgaacgaaaaaagactgccttagaa
aaaaagattccgctcgatgaaacagaaataaaaacacttgccgaccagatcaatgtggca
gaacaggagctggtacgtctgcagacagagtacgcaaatgaagaaaagaatctcaatgag
ctgaaagagcaggtaaaggatgtaacaaaagagggggtacagacacagataaacgagttt
accctgaaaaaaagaaatttagaagagaacagagaaaagacaagagaagcgtatcataat
tacgaaaaaaaccgagagacggaaaagggcgtcattcagatgctgcttcgtcagattgag
gaaacagagaaagcaatatcgtttccggaagaagagatcgaaaaacaggcgggagaactg
cgtgcaaaaagaaatgagatggaagaaaacagggcttcaaaatatacatcttattgtact
aatagggaaatctgtaaaaatgtcagcaaaaaacaaaaagagatcgcacagaccgaacaa
aagtatgtctggatgaaatctctttccgatacggcaagtggaatgttaaacggtaaggca
aagattgaactggaaacttatgtgcagatggcttattttgacaggatactgatccgagca
aaccggaggatgcttacgatgagcagcgggcagtatgaattaaaacgtgaggaagagaca
ggaagccgcaaggaaaaagcaggattggaactttgtgtgattgatcattataacgggaca
aagcgcagtgtaaagacgctttccggtggggagtctttccaggcatcattgtcacttgcg
cttggactgtcggatgagatacagtcttatgcgggtggaatccgtatggattccatgttt
gtggacgagggatttggatcactcgatgaggatgccttagaacaggcgttaaaagcattg
ctgcagctcaccgagggaaatcgtctggtaggaattatttcacatgtatctgaattaaaa
gaccagatcgacaaaaaaataattgtgacaaagcagcggacgccggagggtgtcagcagt
gttgcaagagtggaataa
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