Roseburia intestinalis XB6B4: RO1_09010
Help
Entry
RO1_09010 CDS
T02597
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RO1_09010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rix03019
]
RO1_09010
03110 Chaperones and folding catalysts [BR:
rix03110
]
RO1_09010
03029 Mitochondrial biogenesis [BR:
rix03029
]
RO1_09010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rix04147
]
RO1_09010
Enzymes [BR:
rix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RO1_09010
Messenger RNA biogenesis [BR:
rix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RO1_09010
Chaperones and folding catalysts [BR:
rix03110
]
Heat shock proteins
HSP60 / Chaperonin
RO1_09010
Mitochondrial biogenesis [BR:
rix03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RO1_09010
Exosome [BR:
rix04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RO1_09010
Exosomal proteins of other body fluids (saliva and urine)
RO1_09010
Exosomal proteins of breast cancer cells
RO1_09010
Exosomal proteins of colorectal cancer cells
RO1_09010
Exosomal proteins of bladder cancer cells
RO1_09010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CBL11584
UniProt:
D4KW44
LinkDB
All DBs
Position
914682..916304
Genome browser
AA seq
540 aa
AA seq
DB search
MAKEIKYGTEARAALGAGVDKLANTVRVTLGPKGRNVVLDKSYGAPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMVQEGMKNLEAGANPIILRRGMK
KATDKAVEAILAMSSKVNGKDQIAKVAAISAGDENVGNMVADAMEKVSNDGVITIEESKT
MQTELDLVEGMQFDRGYVSAYMCTDMDKMEAVLDDPYILITDKKISNIQEILPLLEQIVQ
SGARLLIIAEDIEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKAMLEDIAILTGGQVIS
SDLGLELKDTTMDQLGRAKSVKVQKENTVIVDGAGDKDAIASRVNQIRGQIEETTSEFDK
EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGIIAGGGSAYIHA
TKAVAELADTLEGDEKTGAKVILKALEAPLYYISANAGLEGAVIINKVKESKDGIGFNAA
TEEYVDMVENGILDPVKVTRTALQNATSVASTLLTTESVVANIKEDVPAVPAGNPGMGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattaaatatggcacagaagcaagagcagcattaggtgcaggtgtagat
aaactggcaaataccgtaagagtaacattaggaccgaaaggaagaaacgtagtacttgac
aaatcctacggtgctccactgatcacaaacgatggtgttacgatcgcaaaagagatcgag
ttagaagatgcattcgagaacatgggtgcacagcttgtaaaagaagttgcaacaaagaca
aacgatgttgcaggtgatggtaccacaacagcaactgttttagcacaggcaatggtacag
gaaggtatgaagaaccttgaagcaggtgcaaacccgatcatccttcgccgtggtatgaag
aaagcaacagataaagctgtagaagcaatccttgcaatgtcttccaaagtaaacggaaaa
gaccagatcgcaaaagtagctgcaatctctgcaggagatgagaacgtaggtaacatggta
gccgacgcgatggaaaaagtttccaacgatggtgttatcacaatcgaggaatctaagaca
atgcagacagagcttgacttagtagaaggtatgcagtttgatcgtggttatgtatctgct
tacatgtgcacagatatggacaaaatggaagcagtattagatgatccttacatcttaatt
acagataagaagatcagcaacattcaggagattcttcctctgttagagcagatcgtacag
agcggcgcaagattactcatcatcgctgaggacatcgagggtgaggcacttaccacattg
attgtcaacaaattgcgtggtacattcaacgtagtagctgtcaaagcacctggttatggt
gacagaagaaaagcaatgcttgaagatatcgcaatcttaacaggtggtcaggtaatcagc
tctgatcttggtctggaattaaaagacacaacgatggatcagttaggccgtgcaaaatct
gtcaaagttcagaaagagaacacagtaatcgttgacggtgccggtgacaaagatgcaatc
gcaagcagagtaaaccagatccgtggacagatcgaggagacaacatctgagttcgataaa
gagaaattacaggagagacttgctaaattagcaggcggtgtcgcagtcatccgtgtcggt
gcagcaactgagacagagatgaaagaagcaaaacttcgtatggaagatgctttaaatgca
acaagagcagcagtagaagaaggtatcatcgcaggcggcggttctgcatatatccatgca
accaaagctgttgcagagttagctgacaccttagagggtgatgagaagaccggtgcaaag
gttatcttaaaagctctcgaagctccgttatactacatttctgcaaacgcaggtcttgag
ggtgctgttatcatcaacaaagtaaaagagtccaaagacggtatcggattcaacgcagca
accgaagaatatgtagatatggttgagaatggtatccttgacccggttaaagttacaaga
acagcattacagaacgcaacatctgttgcatctacactgcttacaacagagtctgttgtt
gcaaacatcaaagaagatgttccggcagttccagcaggtaacccgggcatgggaatgatg
taa
DBGET
integrated database retrieval system
