Roseburia intestinalis XB6B4: RO1_10180
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Entry
RO1_10180 CDS
T02597
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rix03016
]
RO1_10180
Enzymes [BR:
rix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RO1_10180
Transfer RNA biogenesis [BR:
rix03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RO1_10180
Prokaryotic type
RO1_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CBL11681
UniProt:
D4KWE1
LinkDB
All DBs
Position
1026925..1027890
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AA seq
321 aa
AA seq
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MTAVHETGKFMINGIINVYKEKGYTSFDVVAKLRGILKTKKIGHTGTLDPDAEGVLPVCL
GKATKVCDLLTDKNKEYVAVMLLGKVTDTQDTTGTVLEEHLVEVTEEQVKEAVLSFTGEY
MQVPPMYSALKVNGKKLCDLARAGVTVERQARPVQLYSIEIIKMELPRVCMRVRCSKGTY
IRTLCQDIGEKLSCGACMESLLRTKVSEFCVQDALRLSEIEERVQKAAGQTPSEQWNAEM
FDFIYAVDSVFLQYKKAVICKEWNKLLYNGNRMKKDMFVSYQKDWEQQKVRIYDEEGRFI
GIYEYSEIHGDYKPVKLFMEA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgtacatgagacgggaaaatttatgattaacggaattatcaatgtatacaaa
gaaaaaggatatacatcctttgatgtggtcgcaaaactaagaggtattttaaaaacaaag
aaaatcggacacacagggacactcgatccggatgcggagggagtgcttcctgtgtgtctt
ggtaaagcgacaaaagtctgcgaccttttgacggacaaaaacaaagaatacgttgcggtg
atgctgcttggaaaggtgacagacacgcaggataccacgggaactgttttagaggaacat
ctggtagaagtaacggaagagcaggtaaaagaggcagttctttcttttacaggggaatac
atgcaggttccgccgatgtattctgcattaaaagtgaacggaaagaaactgtgcgatctc
gcaagggccggtgtgacggtggaacgtcaggcaagaccggttcagctctattccattgag
attattaaaatggaactgccccgggtctgtatgcgtgtgcgctgctcaaagggaacttat
atccgtacattatgtcaggacatcggtgagaaactttcctgtggagcatgtatggaatcc
ttgctgcgcacaaaggtatctgaattttgtgtacaggatgcgcttcgcctctccgagatc
gaagaacgtgtacaaaaagcggcaggacagacaccgtcagaacagtggaacgcagagatg
tttgattttatttatgcggttgattccgtatttttacagtataaaaaagcggtgatctgc
aaagaatggaacaaactgttatataatggaaaccggatgaaaaaagacatgtttgtttct
tatcagaaagactgggaacagcagaaggttcgtatttatgatgaagaagggcgttttatc
gggatatatgagtactccgagatacacggggattataaaccggtaaaattgtttatggaa
gcatga
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