Roseburia intestinalis XB6B4: RO1_12240
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Entry
RO1_12240 CDS
T02597
Name
(GenBank) tyrosine recombinase XerD subunit
KO
K04763
integrase/recombinase XerD
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rix03036
]
RO1_12240
Chromosome and associated proteins [BR:
rix03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RO1_12240
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
CBL11863
UniProt:
D4KWX3
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All DBs
Position
1226417..1227301
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AA seq
294 aa
AA seq
DB search
MTHDIMDFIEYIHNEKQTSKNTEVSYERDLRKMNEYLEAQNVYGVSAVTETNLNAYVMFL
EREGRKPATVSRSIASMKAFFHFLEKERRIESDPAWRLKAPKIEKTMPRILTTEEVTLLL
EQPSGNTPKELRDKAMLELLYATGIRVSELISLKVSDLNLQMEYVICTDIHKERIIPFGN
VAREALTRYMQDGRDHLISQADCPWLFTNCTGGAMSRQGFWKLIKFYGKKAGIESEITPH
TLRHSFAAHLISNGADLKSVQEMLGHSDISTTQIYSQMGQGRIREVYLKAHPRG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacacatgacattatggattttattgaatatattcacaatgaaaaacagacatcaaag
aatacggaagtttcctatgaacgtgatctccgcaagatgaatgaatatctggaagcgcag
aatgtatacggggtgtctgccgttacggagacaaatctgaatgcatatgttatgttttta
gaacgtgaaggacggaaaccggcgacggtttcaaggagcattgcatcaatgaaagctttt
tttcattttcttgaaaaggagcggagaatcgagtcggatccggcatggcgtttgaaagca
cctaagattgaaaaaacgatgccgcgtatcctgaccacggaagaagtgacgcttttgtta
gagcagccgtccggaaatacaccgaaagagctgcgggataaggcgatgcttgaattgctt
tacgcgacaggaatccgtgtgtcggagctgatatcgttaaaagtctcggatctgaatctt
cagatggagtatgtgatctgtacggatatccataaagaacggatcattccatttgggaat
gtcgcaagggaggcactgacaagatatatgcaggatggaagagatcatctgatcagccag
gcggactgtccgtggctgtttacgaattgtaccggtggtgcaatgagccgtcagggtttc
tggaaactgatcaagttttatgggaagaaggcggggatcgaatcagagatcacaccgcat
acgctgcgccattcgtttgcggcacatctgatcagcaatggagcagatttaaagtcggtg
caggagatgttaggacattctgatatttctacgacacagatttattcgcagatggggcag
ggaagaatccgggaagtgtatctgaaagcacatccgagaggatag
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