Roseburia intestinalis XB6B4: RO1_12450
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Entry
RO1_12450 CDS
T02597
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00900
Terpenoid backbone biosynthesis
rix01100
Metabolic pathways
rix01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RO1_12450
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rix01006
]
RO1_12450
Enzymes [BR:
rix01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RO1_12450
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RO1_12450
2.5.1.29 geranylgeranyl diphosphate synthase
RO1_12450
Prenyltransferases [BR:
rix01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RO1_12450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CBL11882
UniProt:
D4KWZ2
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All DBs
Position
1247436..1248326
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AA seq
296 aa
AA seq
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MDIKAEIGRHTDEAEQIITSYLPEEKGYQKTVIEAMNYSFLAGGKRLRPILMLETYRLFG
GRSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDALLTY
AFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLDFIYR
LKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTSTMEVLGKPIG
SDEKNHKSTYVTYEGIEKAKQDVADLSEKAIAQMETLVVKNEFLTELLRYLISREK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaagcggaaataggcagacatacagatgaggcagaacagatcataacttcc
tatctgccagaggaaaagggatatcagaaaactgtgatcgaggcaatgaattacagtttt
cttgcaggaggaaaaagattacggccgattcttatgttagagacttaccggctgtttggc
ggaagatcgaaagtaatcgagccgtttatggctgcaatcgagatgatacatacatactca
ctggtgcatgatgatcttccggcgatggataatgacgaataccgccgtggcaaaaagaca
acacatgtggtgtatggggaggcaatggcgatccttgccggggatgctcttttgacatat
gcatttgagacggcggcgaaggcactggatatcgaaccacagaatccgggaattggaaaa
gcaatccgtattttgtctgcaaaagcgggaatttatggaatggtcggcggacagacagtg
gatgttgagtctgagaatacctgtgatatgacaaaagaaaaacttgattttatctatcgt
ctcaagacaagtgcgctgatcgaggcgtccatgatgattggagctgttcttgctggggcg
accggaagtgaacagaagatcgtggaagcggtggcatcaaaagtcggccttgcattccag
atacaggatgatatcctcgatgtgacaagtacgatggaagtgcttggaaagccgatcggc
agtgatgagaagaatcacaagagcacctatgtgacgtatgaaggaatcgagaaggcaaaa
caggatgttgcagacctttcggaaaaggcgatcgcacagatggagacactggttgtgaag
aatgaattcctgacagaattattgcgctatctgatttcgcgtgaaaaataa
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