Roseburia intestinalis XB6B4: RO1_12820
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Entry
RO1_12820 CDS
T02597
Name
(GenBank) Alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00511
Other glycan degradation
rix04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RO1_12820
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
RO1_12820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rix04147
]
RO1_12820
Enzymes [BR:
rix01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
RO1_12820
Exosome [BR:
rix04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RO1_12820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
Motif
Other DBs
NCBI-ProteinID:
CBL11915
UniProt:
D4KX25
LinkDB
All DBs
Position
1285048..1286532
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AA seq
494 aa
AA seq
DB search
MSEQQKEQQLLETVDRIIAEGPYQPAWSSLMQAKTPDWFKQKRFGIFIHWGVYSVPANSN
EWYPRNMYIEGMPAYEHHIKTYGSQKDFGYKDFIPMFHAEKFDPAEWVRLFKEAGAGYVF
PVAEHHDGFQMYKSELSHWNSAEMGPKRDVLGELKAEIEKQGLTFCTSSHRAEHWFFLGH
GKEFDSDIKEPLQKGDLYWPSMPEPDAEDLYGEPYPTEEFLNDWLARTAEIILNYKPSLL
YFDWWVQHQAFKPYLKKLAAFYYNCGVKWGKDVNICYKHDAMMFGSGIVEVERGGFAEAK
PYDWQTDTAVARNSWCYTDTLDYKSSNEIICTLVDVVSKNGNLLLNIGPKADGTIPDGDR
AILEDLAKWMKVNSEAVIGANVWRKSMEGPTAAAEGQFQDQKELKFTNKDYRFTINHGNI
YAIALQCPKDGVFCIRSLADSSDQNVPEFHGIIESVDILGYDGRLQWSVDGEGLHVTAPG
IDSEFPVVVRVRPE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacagcagaaagaacaacaacttctcgaaaccgtagaccgcatcatcgcagaa
ggcccgtaccagccagcctggtcatccctgatgcaggcgaaaacccctgactggtttaaa
cagaaaagatttggcatcttcatccactggggcgtctacagtgttcccgccaactccaac
gaatggtacccaagaaacatgtacatcgagggaatgcccgcatacgaacaccatataaaa
acctacggcagccagaaagactttggatataaagacttcatcccgatgttccacgccgaa
aaatttgacccggcagaatgggtgcgtttattcaaagaagccggtgccggttatgtgttt
ccggttgcagaacaccatgatggatttcagatgtacaaaagtgaactgtcccactggaat
tcggcagagatggggccgaaacgggacgtgcttggtgaactgaaagcggagattgagaaa
cagggacttacgttctgcacatcatcccaccgtgcagaacattggtttttcttaggacac
ggaaaagaatttgacagtgatatcaaagaaccattgcaaaaaggagacctgtactggccg
tccatgccggaaccggatgcagaagatctctacggagagccgtatccgacagaagaattt
ttaaatgactggttagcacgcacagcggaaattatattaaattataaaccatccctgctg
tattttgactggtgggtgcagcatcaggcgttcaaaccatatttaaagaaactcgctgca
ttttattacaactgcggcgtgaaatggggcaaagatgttaatatctgttataaacatgat
gcgatgatgtttggcagtggaattgtggaagtggagcgcggtgggtttgcggaagcaaag
ccctatgattggcagaccgatacggcagttgcaagaaattcctggtgctatactgacaca
ttggattataaaagcagcaatgagatcatttgtacactcgtggatgtggtcagcaaaaat
ggtaatcttctgttaaatatcggtccgaaggcggatggaacgatcccggatggtgaccgt
gctattttggaagatcttgcaaaatggatgaaagtaaacagtgaggccgttatcggtgca
aatgtctggcgaaaatccatggaaggtccgacggcagcggcagaaggacagtttcaggat
cagaaagaactgaaatttacaaacaaagattaccgttttacgattaatcatggaaatatt
tacgcaattgcgttacaatgtcctaaagatggtgttttctgtatccgttcactggcagac
agcagtgatcagaatgtgccggagtttcatggtatcattgagtcggtggatattttagga
tatgatggcaggctgcaatggtctgtggacggggaaggacttcatgtaaccgcacctgga
atagacagtgagtttccggttgttgtgcgtgtgcgtccggaataa
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