Roseburia intestinalis XB6B4: RO1_12840
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Entry
RO1_12840 CDS
T02597
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RO1_12840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rix02000
]
RO1_12840
Transporters [BR:
rix02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
RO1_12840
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
CBL11917
UniProt:
D4KX27
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Position
1288445..1290187
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AA seq
580 aa
AA seq
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MGRSFLYKGIGKTFVCKYFACNRTVCSRIVSGLITGSLLMGLYGCGATENTTVSDTQKQE
SSQEDLEPVTFTFYNADGMEDTWTDPVAQKITEKTGVTLKMDYPADASDNRIALMVATGE
YPDLVFAKGDAPTLIQNDALIDMSDLIDEYGPNIKKLYGDEYENLRYSSDDPSIYQLCSD
KVQEETLETSGTAQLQWAVLQENGYQIPYTLDEYTQMIRDYMVKYPTINEKPTIGISIAC
SDWHWYTMLSNPSGFIANGSPDNGQWIVDEDKEEVYYKHAADGQKEYYEWLNEIYNEGIL
DPEFATQTHEDYIMKIADGRVLGLLDKDWDYANAEVSLRSEGQDERTYAGLPVTIDESVK
CPSLKQRSLAVGWGIGITKSCKDPVRAVKFLDWICSDEGQILLNWGIEGVNYYYDENGKR
CITEEDLEVSKSDTNYSERTGVGFRVYPFPSYGNEAVDSTGNSYSKSSRNVVKESYDEME
KEALKAWNADMLIDIFPQKEEFEKENYSPLWSLTLPDELNQILSNLNDIAWKGLIDCIVC
KPEDFDAKWDEMQQKLKTVGLKKADQEMTALLREEISRRE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggagttttttatacaaaggtataggtaaaacttttgtatgtaaatattttgca
tgcaatagaacagtgtgcagcaggatcgtaagtggtcttatcacaggcagtctgctgatg
gggttatatggctgtggtgccacagaaaatacaactgtttcagacacacaaaagcaggag
agcagtcaggaagatttagaaccggttacatttacattttataatgcggacgggatggag
gacacatggacagatcctgtcgcacagaaaataacagaaaagacaggtgttacgctaaag
atggattaccctgcggatgccagtgataaccgtattgcgctgatggttgcaaccggggaa
tatccggatcttgtgtttgcaaaaggggatgctccgacattgatccagaatgatgcattg
attgatatgtcagatctgatcgatgagtatggtcctaatattaaaaaattgtatggagat
gagtacgaaaatctgcgttattccagtgatgatccatctatttaccagttatgcagtgac
aaggtgcaggaagaaacattggaaacatcagggacagcccagctccagtgggcggtattg
caggaaaacgggtatcagataccatatacattagatgaatatacacagatgatccgtgac
tatatggtaaaatatcccactattaatgaaaaaccgaccatcggtatttccattgcatgt
tctgactggcactggtatacgatgctgtctaatccgtccgggtttatcgcaaatggttcg
ccggataatggtcagtggatcgtggatgaggacaaggaagaagtatattataagcatgca
gcggatggacagaaagaatattatgaatggctgaacgaaatatataatgaaggaatttta
gatccggaatttgccacacagacacacgaagattatattatgaagattgcagacggcagg
gtgcttggactgctggataaagactgggattatgcaaatgcggaggtatctttaagatcg
gaaggacaggacgagcggacttatgcgggacttccggttacgattgatgaatctgtaaaa
tgcccgtctttaaagcagagaagtctggcagtcggctggggaatcggtattacgaaaagc
tgtaaagatcctgtacgggcggtcaaatttctggactggatatgcagtgatgagggacag
atccttctgaactggggaatcgaaggagttaactactattatgatgaaaatggaaaacgc
tgtattacggaggaagaccttgaggtatcgaaaagtgatacgaattattcggagcgcaca
ggagttggcttccgtgtatatccgtttccaagttatggaaatgaggcagttgattctacc
ggcaattcatacagcaagagttcaagaaatgtggtaaaggaaagttatgatgagatggaa
aaagaggcattaaaagcatggaatgcagatatgctgatcgatattttcccacagaaagaa
gaatttgaaaaagaaaattattcaccgctctggtctttgacactgccggatgagctgaat
cagatattaagtaatctgaatgacatagcatggaaaggactgatcgactgcattgtctgc
aaaccggaggattttgatgcaaaatgggatgagatgcagcaaaaattaaaaactgtcggt
ctaaaaaaagcagatcaggaaatgaccgcattactgcgggaagagatcagccgccgagag
tag
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