Roseburia intestinalis XB6B4: RO1_13230
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Entry
RO1_13230 CDS
T02597
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
KO
K10188
lactose/L-arabinose transport system substrate-binding protein
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RO1_13230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rix02000
]
RO1_13230
Transporters [BR:
rix02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Lactose/L-arabinose transporter
RO1_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Asp_protease_2
Motif
Other DBs
NCBI-ProteinID:
CBL11953
UniProt:
D4KX63
LinkDB
All DBs
Position
1334610..1335752
Genome browser
AA seq
380 aa
AA seq
DB search
MEQAEKIYQKDHPDFKLDIQENIYNDIETKLITAATSGDYSTLPDIFLMQDYSFHKNIAN
FPGIFTELTDSGIDFSQFTEGKLADSTAEGKNYGLPFDNGATIMAIRSDMVEAAGLTVDD
FKDTTWSQFEELAKKVVEANGVPMIASSGGSELLMEMLQSAGASPIVDGKVHIADNEALK
KTMEVYKKLVDEGIIAEYTDWDQYIASMNDGKTAGVINGCWIMSSIQAAEDQSGKWAIVN
MPKLDGVDGATNYANCGGASWAVSSNCKNTELAFDFLKSTFGSSVELYDDLLPNAGAIAS
YIPAAQSDVYNQASDFYGGQAVYKDIVGYAGSVPAFDCGAYYSDIRSALTDAITNVVQNN
ADIDGEMNNAQETLEFNIEN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcagaaaagatttatcagaaagaccatccagattttaaactggatattcag
gaaaatatttataatgatattgagacaaagctgattacagctgcaacgtcaggagattac
agtactttaccggatatttttctgatgcaggattattcattccataaaaatattgccaat
tttcctggaatttttacagaattaacagattccggaattgatttttcacagtttacagag
ggaaaacttgcagattccacggcagagggaaaaaattatggacttccttttgataatggt
gcaacgattatggcaattcgttcggatatggtagaggcggcaggtcttacggttgacgat
tttaaggatactacatggtcacagtttgaggaacttgcaaaaaaagtagtagaggcgaat
ggagtgccaatgatcgcttcctccgggggatccgaattacttatggaaatgctgcagtcg
gcaggagcctcaccaattgttgacggaaaggttcatattgcagacaatgaagcgttaaaa
aagacaatggaagtttataaaaaattagttgatgagggtattattgccgagtatacggac
tgggatcagtatattgcctctatgaatgacggaaaaacagcaggagtgatcaatggatgc
tggatcatgtcatccattcaggcggcagaggatcagtcaggaaaatgggcaattgtaaac
atgccaaaactggatggagttgatggagccacaaattatgcaaattgtggtggtgcaagc
tgggcagtatcttctaactgtaagaatacagaacttgcatttgatttcttaaaatctaca
tttggaagcagtgtggaattatatgatgatctgttgccgaatgcaggtgcgattgcaagc
tacattccggctgcacagtctgatgtatataatcaggcatcagatttttatggtggacag
gcagtatataaagatatcgttggatatgcaggttcggttccagcatttgactgtggtgca
tactattcggacataagaagtgcattgacagatgcaatcacaaatgttgttcagaataat
gctgatattgacggtgaaatgaataatgcacaggaaacattagaatttaatattgaaaat
taa
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