Roseburia intestinalis XB6B4: RO1_13370
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Entry
RO1_13370 CDS
T02597
Name
(GenBank) Holliday junction DNA helicase, RuvB subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RO1_13370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_13370
Enzymes [BR:
rix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RO1_13370
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RO1_13370
RecFOR pathway proteins
RO1_13370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
RNA_helicase
nSTAND3
Bac_DnaA
AAA_16
AAA_3
DUF815
Sigma54_activ_2
IstB_IS21
TsaE
NB-ARC
Resolvase
MCM
AAA_18
Parvo_NS1
AAA_28
AAA_17
AAA_PrkA
AAA_24
Rad17
Motif
Other DBs
NCBI-ProteinID:
CBL11966
UniProt:
D4KX76
LinkDB
All DBs
Position
1346889..1347881
Genome browser
AA seq
330 aa
AA seq
DB search
MEKRVISTQVQEEDIKIEKSLRPQTLDDYIGQQKAKENLKVYIEAAKQRGEALDHVLFYG
PPGLGKTTLAGIIANEMGTHLKVTSGPAIGKPGEMAAILSNLQEGDVLFVDEIHRLNRQV
EEVLYPAMEDYVIDIMIGKGATARAIRLDLPKFTLVGATTRAGLLSAPLRDRFGVVHHLE
FYTVEELKTIILHSAKTLGVEIDEEGAFELARRSRGTPRLANRLLKRVRDFAEVKYDGKI
SKEVAAFALDLLEVDKMGLDQNDRNILKIMIEKFSGGPVGLDTLAAAIGEDSGTIEDVYE
PYLVKNGFINRTPKGRVVTDFAYQHFGLTK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagagtcatttccacgcaggtgcaggaagaggatattaaaattgaaaaaagc
ctgcgtccgcagacgcttgatgattatatcggacagcagaaggcgaaggaaaatttaaaa
gtatatattgaagctgcaaaacagagaggcgaggcgttggatcacgtacttttttatggt
cctcccggacttggaaaaacgacgcttgcaggaatcattgcaaatgagatgggaacacat
cttaaggtgacaagtggccctgcaatcggaaaaccgggagagatggcagctatcttaagc
aatctgcaggagggggatgtcctgtttgtggatgagatacacaggttaaaccgccaggtg
gaagaagttctttatccggcaatggaagactatgtgatcgatattatgatcggaaaaggg
gcaactgcgcgtgcaatccgtctggatctgccgaaatttacgctggtcggtgcaactacg
agagcggggcttttgtcagcaccgctccgtgaccgttttggcgtggtgcatcatctggaa
ttttatacggtggaggaactaaagacgatcattcttcattctgcaaaaacactgggtgtt
gaaattgatgaggaaggtgcatttgagcttgcaagacgttcgcgtggaacaccacgactg
gcaaaccgtctgttaaagcgtgtcagggatttcgcagaggtgaaatatgacggaaagata
tcaaaggaagttgctgcctttgcgctggatctcttagaggttgataagatgggactcgat
cagaatgaccgcaatatcttaaagatcatgatcgaaaaattttccggcgggccggtagga
ctcgatacgttagcagcggcgatcggcgaagattccgggacgattgaagacgtgtatgaa
ccgtacctggtcaaaaacggatttattaaccgtacgccgaaaggacgcgtggtaactgat
tttgcatatcagcatttcggattgacaaaatag
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