Roseburia intestinalis XB6B4: RO1_13950
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Entry
RO1_13950 CDS
T02597
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rix03009
]
RO1_13950
Enzymes [BR:
rix01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RO1_13950
Ribosome biogenesis [BR:
rix03009
]
Prokaryotic type
ribosomal protein modification factors
RO1_13950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
CBL12018
UniProt:
D4KXC8
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All DBs
Position
1407769..1409103
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AA seq
444 aa
AA seq
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MKNNLKLLFVSLGCDKNLVDTEFMLGMLRDDGIEMTDDEQEADIIIVNTCCFINDAKEES
INTILEMAELKKEARLKSLIVTGCLAQRYKEEIVKEIPEVDAILGTNSYEDIVNAVHQSL
EGKHYENFKTLEGLPTLHTKRSVTTGGHFAYLKIAEGCNKRCTYCIIPYIRGNYRSVPME
DLIEQAKELVAAGAKELILVAQETTLYGVDLYGEKSLHRLLDELNKIEDLFWIRIMYCYP
EEIYEGLIDAMIRNQKVCHYLDIPIQHANDTILKRMGRRTSNADLVKIITHLRERIPDIT
LRTTLICGFPGETQEMHEELMQFINDMEFDRLGAFTYSPEEGTPAAEFTDQVDENLKKDW
QADVMELQEEIIFDKNETMKGRELYVFIEGKVSDENAYVGRTYRDAPDVDGYIFINTDEE
LMTGDIAKVRVTGAYEYDLIGELI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataatttaaaacttttatttgtatcacttggatgtgacaagaatctggtcgac
acagagtttatgcttggcatgttaagagatgatggaatcgaaatgacagatgatgagcag
gaagcagacattatcattgtcaatacctgctgctttatcaatgatgcaaaagaagaaagt
atcaatacgattcttgagatggcagaactgaaaaaagaagccagattaaagtctctgatc
gtgaccggatgccttgcacagcgttataaagaagaaatcgtaaaagaaatcccggaagtg
gatgcaattcttggaacgaattcctatgaggatattgtaaacgcagtgcatcagtcctta
gagggcaaacattatgagaatttcaagaccttagagggattgccgacactgcacaccaaa
cgttctgtgacaacaggcggacattttgcttatttaaagatcgcagagggatgcaacaag
cgctgcacatactgcattattccgtatatccgcggaaattaccgcagtgttccgatggaa
gatctgatcgaacaggcaaaagaactggttgctgcaggagcaaaagaactcatcctggtg
gcacaggagaccacactctacggagttgatctctatggtgaaaagtcactgcaccgttta
ttagatgagttaaacaagatcgaagacctgttctggatccgtattatgtactgttatccg
gaagaaatatacgaaggtctgatcgatgccatgatccgcaatcagaaagtatgtcattat
ctggatatcccgatccagcatgcaaatgataccatattaaaacgcatgggacgaagaacg
agtaatgcagatcttgtaaagatcattacgcatctgcgtgaacgcattccggacattaca
ctgcgtacgacgctgatctgtggtttcccgggtgaaacacaggaaatgcatgaggaactg
atgcagtttatcaatgacatggaatttgaccgtcttggtgcttttacctattcaccggag
gagggaacgcctgctgcagagtttaccgatcaggtggatgaaaatctgaaaaaagactgg
caggcagatgtcatggaattacaggaagagattatttttgataaaaatgagaccatgaaa
ggcagagagttatacgttttcattgaagggaaagtgagtgatgaaaatgcttatgttgga
agaacttaccgtgatgcaccggatgtagatggttatatttttattaatacagatgaagaa
ctcatgacgggcgatatcgcgaaagtacgtgtgacaggcgcctatgagtatgacctgatt
ggagaattgatctag
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