Roseburia intestinalis XB6B4: RO1_17450
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Entry
RO1_17450 CDS
T02597
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RO1_17450
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rix01007
]
RO1_17450
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rix03016
]
RO1_17450
Enzymes [BR:
rix01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RO1_17450
Amino acid related enzymes [BR:
rix01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RO1_17450
Transfer RNA biogenesis [BR:
rix03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RO1_17450
Prokaryotic type
RO1_17450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
tRNA-synt_2
CCDC113_CCDC96_CC
Scaffolding_pro
FapA
DUF3450
Spidroin_N
DUF2229
ERM_helical
DUF2205
Motif
Other DBs
NCBI-ProteinID:
CBL12315
UniProt:
D4KY75
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All DBs
Position
1749594..1750883
Genome browser
AA seq
429 aa
AA seq
DB search
MIDLKFLRENPEVVKQNIKNKFQDHKLPLVDEVIELDAKARAVQQEADDLRASRNKLSKQ
IGQLMGQGKKDEAEAVKAQVNANAARLAELEEQEKELQEKVTRIMMTIPNIIDPSVPIGK
DDSCNVEIEKFGDPVVPDFEIPYHTDIMERFNGIDLDAAGKVAGNGFYYLMGDIARLHSA
VISYARDFMIDRGFTYVIPPFMIRSNVVTGVMSFDEMDAMMYKIEGEDLYLIGTSEHSMI
GKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESKT
WYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNLG
DAQARRLKIRVKGSDGNKYFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNVPKALQPYMG
GKEKLVPLK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttaaaatttttaagagagaatccggaagttgtaaaacagaacattaaaaat
aagtttcaggatcacaaacttccgttagtagatgaggtaattgaacttgatgcaaaggca
agagctgtacagcaggaagcagacgatttgcgtgcaagcagaaataaactgtcaaaacag
atcggacagctgatggggcagggaaaaaaagatgaggcagaggcagtaaaagcacaggta
aatgccaatgcagcacgtcttgcagagttagaggagcaggaaaaagaactgcaggagaaa
gtaaccaggatcatgatgacgatcccgaacatcatcgatccgtccgtaccgatcggaaaa
gatgacagctgcaatgtagagatcgaaaaatttggcgatccggtcgtaccggatttcgag
atcccatatcacacagacatcatggagcgtttcaatggtattgatcttgatgcggcagga
aaagttgcaggaaacggtttctattatctgatgggtgatatcgcgcgccttcattctgca
gtgatttcctatgcgcgtgatttcatgatcgaccgtggatttacttatgtcattccgccg
tttatgatccgaagcaacgttgttacgggcgttatgagctttgacgagatggatgcgatg
atgtacaagatcgagggcgaggatctctatctgatcggtacttccgaacattccatgatc
ggtaaattcatcgacacgattaacgacgaagaaaaacttccatacacactgacttcctac
tctccatgtttccgtaaagagaaaggtgcacacggtatcgaggagcgtggtgtataccgt
atccaccagttcgagaaacaggagatgatcgtggtctgcaaaccggaagaatctaagacg
tggtatgataaattatggcagaacacggtagacttattccgcagtctggatatcccggtt
cgtactttagagtgctgctccggtgaccttgctgacttaaaggtaaaatcctgtgatgtt
gaggcatggtctccaagacagaagaaatactttgaggtcggaagctgctcgaacttagga
gatgcacaggcaagacgtttaaagatccgtgtgaaaggttccgatggaaacaaatatttt
gcacataccttaaacaacacggttgttgcaccgcctagaatgctgatcgcatttttagag
aacaacttaaatgaggacggaagcgtcaatgtaccgaaggcattacagccgtacatgggc
ggaaaagagaaactggttcctttgaaataa
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