Roseburia intestinalis XB6B4: RO1_18040
Help
Entry
RO1_18040 CDS
T02597
Name
(GenBank) Transcriptional regulators
KO
K03604
LacI family transcriptional regulator, purine nucleotide synthesis repressor
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rix03000
]
RO1_18040
Transcription factors [BR:
rix03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RO1_18040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
HTH_10
Fe_dep_repress
HTH_23
HTH_11
HTH_3
HTH_31
HTH_Crp_2
Sigma70_r4_2
DUF374
CYNS_N
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
CBL12369
UniProt:
D4KYC9
LinkDB
All DBs
Position
1809905..1810930
Genome browser
AA seq
341 aa
AA seq
DB search
MAKAVKLADIAEQLGVSTVTVSKALSGQKGVSEAMREKIKQLADELGYKQPSAAKKEKSA
KSYNIGVLVSEKYLGEYASFYWRMYQSVATRAVQKECFTMLEVVSLEDEAEANLPKIVLE
RKVDGLIVIGRLKTAYLGALRQNTQIPIVYLDFYDEHQMSDAVISNSYYGTYMLTNYLIE
HGHEKIAYVGTLLFTASITDRYFGYRKSMLEHGIEVPQEWIIQDRDMECGVVEVDIHPDQ
MKDMPTAFVCNSDLTASMVINQLEEQGYRVPEDFSVVGFDNYLFPGLCDVEITTYEVDIR
EMANKAIHVLLKKVSGERYKQGITIVEGRLVEKASVQQVVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcagtaaagctggcagacattgcagagcagcttggtgtcagtacggtcacg
gtctcaaaagcactttccggacaaaaaggtgtcagcgaggctatgcgggaaaaaattaaa
caactggcagatgaactgggatacaaacagccatctgccgcaaaaaaagaaaagtcggca
aaaagttataatatcggagttttagtatcagaaaaatatcttggagagtatgcatccttt
tactggagaatgtaccagagtgttgcaacaagggccgttcagaaagaatgtttcacgatg
cttgaggttgtttcattagaagatgaagccgaggcgaatctgcctaaaatcgtgctggaa
cgtaaagtagatggtctgatagtgatcgggcggttaaagacagcatatctgggtgcgttg
agacagaatacacagattccgatcgtgtatcttgatttttatgatgaacaccagatgagt
gatgcggtgatctctaacagttactatggtacttacatgctgacgaattatctgatcgag
catggtcatgaaaaaattgcgtatgtcggaactctgttgtttacagcaagtatcacagac
cgttatttcggttaccggaaatccatgttagaacatggtattgaagtgccacaggagtgg
atcatacaggatcgtgatatggaatgtggtgtggtagaggttgatattcatccggatcag
atgaaagatatgccgacggcatttgtgtgcaactccgatctcacggcaagcatggtcatc
aatcagttagaagagcaggggtatcgcgttccggaagatttttcagtggttggatttgat
aactatctttttccgggactgtgtgatgtcgagatcacaacttatgaggttgatatccgt
gaaatggcaaataaagcaatacatgtgctgttaaagaaagtcagcggggaacgttataaa
cagggaattaccattgttgagggaaggctggtggaaaaagccagcgtgcagcaggttgta
aaataa
DBGET
integrated database retrieval system