Roseburia intestinalis XB6B4: RO1_18050
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Entry
RO1_18050 CDS
T02597
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RO1_18050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rix02000
]
RO1_18050
Transporters [BR:
rix02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
RO1_18050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
New_glue
Motif
Other DBs
NCBI-ProteinID:
CBL12370
LinkDB
All DBs
Position
1812295..1813764
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AA seq
489 aa
AA seq
DB search
MKLRKVLAVTLVAAMTMSMAACGGSNNTAGNGGTTDNNSAAADNSTDASNDVAATESGDA
STSADGSLSYADIKLGEDYTDLTATISLFNHRTDLESDDYNGTTWKEYLAAFNEMYPNIT
VELTTDTNYADDALMHLQSGDYETVMMIPAVDKADLSNYFISYGDLDTMKTQINYATTWE
YGGQVYGVPSTATTQGIVYNKKVFEEAGVTELPKTPEEFIGALQKIKDNTDAIPLYTNYA
AGWTMGAWDAYIGNNATGDNTYMNQKLVHTKDPFQNYGDDTHAYAVYKILYDAVADGLIE
DDFATTDWEGCKGMINNGEIGCMVLGSWAYPQMEAAGENGADIGYMPFPITVNGEQYASA
GADYSYGINANATDDEKAAAMVFVKWMTEKSGFSYNEDGLPVAAGSTDTKLSFDGVTFLE
DEPALAGEEDFLNEMNAESELNINAGGDSKIQAIIEHASNGDKTFDEIMDEWNTAWSDAQ
ESNGIEVTE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagaaaagttttagccgttactttagtagcagcaatgaccatgagcatggca
gcatgcggtggctcaaacaacacagcaggcaatgggggaacaacagacaacaacagtgca
gcagcagataacagcacagatgcatcaaatgatgtagcagcaactgagagtggtgatgct
tctacatccgcagacggatctttatcctatgcagatatcaaacttggtgaggattataca
gatctgacagcaacaatttcattattcaaccacagaacagatcttgaatctgacgattat
aacggaacaacatggaaagagtatttagcagcattcaatgaaatgtatcccaatattaca
gttgaacttacaaccgataccaactatgcagatgatgctctgatgcatttacagtccggt
gactatgagacagtcatgatgatcccggcggttgataaggcagacttaagcaattacttt
atttcatatggtgatcttgataccatgaagacccagatcaattatgcaactacatgggag
tatggcggacaggtttacggtgttccttctacagcaactacacagggtatcgtatacaat
aaaaaagtatttgaagaagcaggagttacagaacttccaaagactccggaagaatttatc
ggtgcattacagaaaatcaaagataatacagatgccatcccactttatacaaactatgca
gcaggctggacaatgggagcatgggatgcttacatcggaaataatgcaacaggcgacaat
acatatatgaaccagaaattagttcatacaaaagatccattccagaattatggcgatgat
acacatgcttatgcagtttacaagatcctctatgatgcagttgcagacggactgatcgaa
gatgactttgcaacaactgactgggagggctgtaaaggtatgatcaacaatggtgagatc
ggttgtatggtacttggctcatgggcttatcctcagatggaagcagcaggcgaaaatggc
gcagatatcggttatatgccattcccgatcactgtaaatggtgagcagtatgcatccgca
ggtgctgattactcttatggtatcaatgcaaatgcaacagatgatgaaaaagcagcagct
atggtatttgtaaaatggatgacagaaaaatccggtttctcatacaacgaggatggactt
ccagtcgcagccggcagtacagatacaaaactttccttcgatggcgtaacattcttagag
gatgaacctgcattagctggcgaggaagatttcttaaatgagatgaatgcagagtctgag
ttaaatattaacgcaggtggagacagtaaaatccaggcaatcattgagcatgcatccaat
ggcgataagacatttgatgagatcatggacgaatggaacacagcatggtctgatgcacag
gaatcaaacggaattgaagtaactgagtaa
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