Roseburia intestinalis XB6B4: RO1_19210
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Entry
RO1_19210 CDS
T02597
Name
(GenBank) ABC-type oligopeptide transport system, periplasmic component
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix01501
beta-Lactam resistance
rix02010
ABC transporters
rix02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RO1_19210
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RO1_19210
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RO1_19210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rix02000
]
RO1_19210
Transporters [BR:
rix02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RO1_19210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CBL12468
UniProt:
D4KYM8
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Position
1927327..1929042
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AA seq
571 aa
AA seq
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MKKTKAVLAILMAGTMMLGLAGCGGNSSSATQGTTAGTETGSAAGDAAGTDAAASASDMN
VMLETPVESLDPQQATDGTSFEVIADYTDGLMQMDADGQAVPAIAESYDLSDDGLTYTFH
LRTDAKWSNGTPVTAADFVFGWQRAVDPDVASEYAYMLSDIGQIKNAAEIIAGEKDKSEL
GVTAVDDNTLQVELNVPVSYFTSLMYFPTFYPVNEEFFTSCGDTFATSPETVLSNGAFVL
DSYQPAATAFHLTKNADYYDTDRVKLSGLSYQVIQDSQQALMSYQTGALDTTLVNGEQVD
QVKDDPEFTTVGAGYLWYVSPNMNSVPELANLNIRLAMTMAIDRDSITADVLKDGSASTY
TAVPMQFAAGPDGSDFSEDQTKFSDVCVYDTEKAADYWAKGLEELGESEITLDIVVDADD
APQKVAQVLKEQWETTLPGLTVNLVVEPKKQRVEDMQNGNFQLGLTRWGPDYADPMTYLG
MWVTDNSNNYGLWSNADYDAIIDECTTGDLCTDAEGRWARLYDAEKIVMDEAVIYPLYTQ
CNAEMLSSKVTGVEYHPVAINRVYKDAVKTE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccaaagcagttttggctattttgatggccggaacaatgatgcttggtctt
gcaggctgtggcgggaacagttcttctgcaacacagggaacaaccgcaggcacagagaca
ggcagtgcagcaggtgatgctgcaggaacagatgccgcagcaagcgcatcagacatgaat
gttatgcttgaaactccggtcgagtcactcgatccgcagcaggctaccgacggaacatcc
tttgaggtaatcgctgattacaccgacggtttgatgcagatggatgcagacggacaggca
gttccggcaatcgcagaaagctatgatttatcagacgatggtttaacttatacattccat
cttcgtaccgatgcaaaatggagcaacggcacaccggttaccgcagcagatttcgtattc
ggatggcagagagctgttgatccagatgtcgcatcagagtatgcatatatgttaagcgat
atcggtcagattaaaaatgcagcagagatcatcgcaggtgagaaagacaagagtgaactt
ggtgtgacagcagtagacgacaatacacttcaggttgaactgaatgtaccagtcagctat
ttcacttctctgatgtatttcccgactttctatccggtaaatgaggagttctttacttcc
tgtggagatacatttgcaacaagtcctgagacagtattatcaaacggtgcatttgtgctg
gattcttatcagccggcagcaactgcattccatttaacaaaaaatgcagactactatgat
accgacagagtaaaactttccggattaagttatcaggtaatccaggattcacagcaggca
ttaatgagctaccagacaggagcgcttgatacaacattagtaaacggtgagcaggttgat
caggtaaaagatgatcctgaattcacaaccgttggtgccggttacttatggtatgtcagc
ccgaatatgaattctgttcctgaactcgcaaacttaaatatacgtcttgcaatgacaatg
gcaatcgaccgtgattccatcacagcagatgtattaaaagatggttccgcttctacatac
acagcagttccgatgcagtttgcagcaggtcctgacggatctgacttctccgaagatcag
acgaaattctctgatgtgtgtgtatatgatacagaaaaagcagcagattactgggcaaaa
ggtttagaggaacttggagaatctgagatcactttagacatcgtagtagatgcagatgac
gcacctcagaaagtagcgcaggtattaaaagagcaatgggagacaactcttcctggactg
accgtaaatctggttgttgagccgaagaaacagcgtgtggaagacatgcagaacggtaac
ttccagttaggtttaacacgttggggaccggactacgcagatccaatgacatatcttgga
atgtgggtaacagataactctaacaactacggtctgtggagcaacgcagattacgatgca
atcattgatgagtgtacaaccggtgatctttgcacagatgcagagggacgctgggcaaga
ctttacgatgctgagaagatcgttatggatgaggcagttatttatccgctttacacacag
tgcaacgcagagatgctttcttctaaagtaacaggcgttgagtatcatccggtagctatc
aaccgtgtatacaaagatgctgtaaagactgaataa
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