Roseburia intestinalis XB6B4: RO1_23890
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Entry
RO1_23890 CDS
T02597
Name
(GenBank) DNA-methyltransferase (dcm)
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00270
Cysteine and methionine metabolism
rix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RO1_23890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rix03000
]
RO1_23890
03032 DNA replication proteins [BR:
rix03032
]
RO1_23890
03036 Chromosome and associated proteins [BR:
rix03036
]
RO1_23890
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rix02048
]
RO1_23890
Enzymes [BR:
rix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RO1_23890
Transcription factors [BR:
rix03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RO1_23890
DNA replication proteins [BR:
rix03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RO1_23890
Chromosome and associated proteins [BR:
rix03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RO1_23890
Prokaryotic defense system [BR:
rix02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RO1_23890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Cons_hypoth95
Methyltransf_25
CTSRT
adh_short
FtsJ
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
CBL12877
UniProt:
D4KZT7
LinkDB
All DBs
Position
2411435..2412535
Genome browser
AA seq
366 aa
AA seq
DB search
MSKKFTCVDLFSGAGGLSRGFYDAGYDVVLGVDFDEAALKTFRENHGNAEAMKLDLFNHD
NINVIVDFLRERDIKLDVLVGGPPCQGFSIAGPRDMNDKRNSLYLAMVELADRIKPQAVV
LENVPGMLQTNGGIGARRIVEDFKKIGYVMIPKLLYAPDYGIPQMRKRVFFVGLRDGKTK
FEFPEPVVDKEHYVTCEEAIGDLPSLQTEKGEIIYGEEIQDYTMKPANSYQRKMRSNSGK
VLNHIGSIPIEKTRKMISLVPEGKNYKALPEEYQGIYKYHEALTRYHSKKPSNTINTGHR
SHFHYKWNRIPTVRESARLQSFPDDFIFYGNKSQQYRQVGNAVPPMLGQVVAEKLKQYLK
GQDDVE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaagtttacttgtgttgatttgttttcaggagcgggaggattatcccgtggt
ttttatgatgcaggatatgatgtagttcttggtgtggattttgatgaggcagccttaaaa
acatttagagagaatcatggaaatgctgaagctatgaaactggatttgtttaatcatgac
aacataaatgtaatagttgactttcttcgggaaagagatattaagttggatgttcttgta
gggggaccgccttgtcaaggcttttcgattgccggaccaagagacatgaatgataaaaga
aattcattatatcttgcgatggtagaattggcagatcgaataaaaccgcaagctgtggtt
ttagaaaatgttcccggaatgttgcagacaaatggtggaattggtgccagacgaattgtt
gaagatttcaagaaaataggatatgtaatgattccaaagttattatatgctcctgattat
ggaatcccacagatgcgaaaaagagtgttttttgtgggattaagagacggtaagactaaa
tttgagtttccagagcctgtagttgataaggaacattatgtgacctgtgaggaagccata
ggtgatttgccatcgcttcagacagaaaaaggtgaaattatttatggtgaggaaatacaa
gattatacaatgaagccagcaaatagttatcagaggaaaatgagaagcaattctggaaaa
gttctgaatcatataggaagtattccaattgaaaagacaagaaaaatgatttctctcgtc
ccagaagggaaaaattacaaggcattgccagaggaatatcaaggaatatataagtatcat
gaggctcttacgagatatcatagtaagaaaccatcaaatacaattaatacgggtcataga
tcacactttcattataaatggaacagaataccaacggttagagaaagtgcaagattacag
agtttcccagatgactttattttttatggaaataagtcacagcaatatcgtcaagttgga
aatgctgtacctccgatgttggggcaagttgtggcagagaagttaaaacaatacctgaaa
ggacaagacgatgtcgaataa
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