Roseburia intestinalis XB6B4: RO1_26600
Help
Entry
RO1_26600 CDS
T02597
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03420
Nucleotide excision repair
rix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RO1_26600
03430 Mismatch repair
RO1_26600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_26600
Enzymes [BR:
rix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RO1_26600
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RO1_26600
MMR (mismatch excision repair)
Other MMR factors
RO1_26600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_17
Vp24_capsid
Motif
Other DBs
NCBI-ProteinID:
CBL13107
LinkDB
All DBs
Position
2686810..2689077
Genome browser
AA seq
755 aa
AA seq
DB search
MKEKENITMSIYDTLNEQQREAVYQTEGPVLILAGAGSGKTRVLTHRTAYLIEEKGVNPY
HIMAITFTNKAAGEMRERIDKIVGFGSESIWVSTFHSSCVRILRRHIDRIGFDTNFTIYD
ADDSKSLMKDICKRLEIDTKIYKEKSFLAAISSAKDELITPTELMQRALTSSDYAKRKQA
EVYREYQEALHKNNALDFDDLIMKTVELLQSDPEVKNYYQERFHYIMVDEYQDTNTAQFE
LIRLLAGKYQNLCVVGDDDQSIYKFRGANIYNILNFEKHFPDAKTIKLEQNYRSTQNILN
AANSVIANNVGRKSKTLWTANDEGKKIDFEQFNTGYEEADYIARDIAGGVRNGDYHYGDY
AVLYRTNAQSRLFEERFIVSNIPYKIVGGVNFYARKEVKDLLAYLKTIDNARDDLAVRRI
LNVPKRGIGATTVNRVSDYAESYDISFYDALKRADEIPSIGKAASKVKPFVNLIQVFRSK
LEFISISDLLREVIEETGYVKELEAEGTDEAEARIENIDELLSKVVSYEESEEHPTLSGF
LEEVALVADIDSLEDDSDYVVLMTLHSAKGLEFPKVYLAGMEDGLFPSYMSITSDDSSEQ
LEEERRLAYVGITRAMKELTITCAKQRMIRGETQYNKVSRFVKEIPLELLGGKAPVVSRK
ESDSSIENTWNVKPKRMTMRQQPSGQSMQARAFASVHTKEEKLPYDIADRVLHTRFGEGT
VVAIVEGGRDYEVTVQFDTVGIKKMFASFAKLKKL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaggaaaatataaccatgagtatatatgatacgttgaatgaacagcagaga
gaagcggtatatcagacagaaggtccggtactgatcttagccggggctggctccggtaaa
acacgtgtgctgacacaccgcactgcttatttaatcgaagaaaagggtgtcaatccttac
catatcatggcgatcacttttaccaacaaagcggcgggagagatgcgggagcgaattgat
aaaattgtcggatttggctcggagagcatctgggtatcgaccttccattcaagttgtgtg
agaattttgcgccgtcatatcgaccggatcggatttgacaccaattttacgatttatgat
gcggatgattcaaaatcactgatgaaggatatatgcaagcgtttagagattgataccaag
atttataaagaaaaaagttttttggcagcgatttcatcggcaaaagatgaactgatcaca
ccgacagagctgatgcagcgtgcactgacatcttccgattatgcaaagcgtaaacaggcg
gaggtataccgggaatatcaggaggcgttacataagaataatgcgctggattttgatgat
ctgatcatgaagacggtggaacttttgcagtctgatccggaggtaaaaaattattatcag
gaacgttttcattatattatggtggacgagtatcaggatacgaacacggcacagtttgaa
ctgatccgtcttttggcaggcaaataccagaacctttgtgtggtgggggatgatgaccag
tccatttataagttccgtggagcaaatatttataatatattaaattttgaaaaacatttt
ccggatgcaaagacgatcaagttagagcagaattaccggtctacgcagaatattttaaat
gctgcaaacagtgtgatcgcaaacaatgtcggcagaaaatcaaagacactctggactgca
aatgatgagggaaagaagattgactttgaacagtttaataccggctatgaggaagcagat
tatattgcgcgtgatattgcaggcggggtaagaaacggagattaccattatggggattat
gctgttttgtaccggacgaatgcgcagtcgcgtctgtttgaggagcgttttattgtatca
aacattccatataagatcgttggcggtgtaaatttctatgcgagaaaagaagtgaaagat
ctgctcgcttatttaaagacgatcgacaatgcgcgcgatgatttggcggtgcgccgtatt
ttaaatgttccgaaacgcggtatcggcgcaacaaccgtaaaccgtgtgtctgattatgcg
gagtcatacgatatcagtttttacgatgccttaaagcgtgcggacgagattccttcgatt
ggaaaagcagcgtcaaaggtaaaaccgtttgtaaatctgatccaggtattccgcagtaag
ctggaatttatcagcatttccgatcttctccgggaagtgattgaggaaaccggatatgtc
aaagagcttgaagcggaaggtacggatgaggcagaagcgaggatcgagaatatcgacgag
ctcttaagtaaagttgtgagttacgaggaaagcgaagaacatccgacactgagtggcttt
ttagaagaagtagcactggtggcagacattgacagtctggaagatgacagcgattatgtt
gtattaatgactctgcacagcgcaaaaggacttgaattcccgaaagtgtatttagcaggt
atggaggatggtctgttcccaagttatatgtcgatcacatcggatgattcgagtgagcag
ttagaggaagaacgccgtcttgcctatgtgggtatcacccgtgccatgaaagagctgacg
atcacctgtgcaaagcagagaatgatccgtggggagacacagtacaataaagtttcccgt
tttgtcaaagagataccgctggaacttttaggaggaaaagcccccgttgtttcgcgaaaa
gaatcagattcttcgattgaaaatacatggaatgtgaaaccaaagcgcatgacgatgaga
cagcagccttccggacagagcatgcaggcgcgtgcatttgcctctgttcatacgaaagaa
gaaaagctgccgtatgatattgcagaccgtgttttacatacgcggtttggagaaggaacg
gtggttgccattgttgaaggtgggagagattatgaggttacagtccagtttgacacggtg
ggaattaaaaaaatgtttgcttcttttgcaaaattaaaaaagttataa
DBGET
integrated database retrieval system
