Roseburia intestinalis XB6B4: RO1_26620
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Entry
RO1_26620 CDS
T02597
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rix03009
]
RO1_26620
Enzymes [BR:
rix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RO1_26620
Ribosome biogenesis [BR:
rix03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RO1_26620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
PrmA
N6_N4_Mtase
Methyltransf_15
Methyltransf_11
Methyltransf_32
TRAM
Methyltransf_12
Ubie_methyltran
Met_10
PCMT
RrnaAD
Methyltrans_SAM
AfaD
Methyltr_RsmB-F
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CBL13109
UniProt:
D4L0G9
LinkDB
All DBs
Position
2689620..2691098
Genome browser
AA seq
492 aa
AA seq
DB search
MKKGQIVEGIIERVDFPNKGILRAEDGTRVIVKNAIMGQKVSAAVNKVRKGKGEGRLLEV
LEKSALELPEPGCVHYGICGGCTFQSLPYEEQLSMKEQQVKDLIDAVITEENKGYEFLPI
KASPRPKAYRNKMEFSFGDEYKDGPLALGMHKRGSFYDIVNVGECQIVDEDFRRVLKITL
EYFKEKQIPFYHKLRHTGYLRHFLVRKAAKTGEILVDLVTTTQMEELSGENESALLEGWV
KKLCEEKYDGVLKGILHTKNDSVADTIKNEGTDILFGQDFFYEELLGLKFKITPFSFFQT
NSLGAEVLYQTAREFIGDALDDEANQTVFDLYSGTGTIAQILSPVAKKVIGVEIVEEAVV
AARENAALNGLTNCEFIAGDVLKVIDTIGEKPDYIVLDPPRDGIHPKALEKIIRYNVPQM
VYISCKPTSLARDLEVLQARGYKVKKVQCVDMFPSTGNVETVCLLSKLHEAKHHVNVRLD
MDEMDLTAAERR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggcagatcgtagaaggaatcattgaacgggtggatttcccgaataaagga
attttaagagcggaagatggcacgcgtgtcattgtaaaaaatgcgatcatgggacagaaa
gtatcagcggcggtcaataaggtcagaaaaggaaaaggtgagggacgcctgctcgaggtg
ttggaaaaatctgcactggaactgccggaaccgggatgtgttcattatggtatctgcggc
ggctgtacattccagagccttccgtatgaagaacagctttccatgaaggagcagcaggta
aaagatctgatcgatgcggtcatcaccgaggaaaataagggatatgagtttttaccgatc
aaggcgagcccaagaccaaaggcataccgcaataagatggagttttcatttggagatgaa
tataaggacgggccgttagcacttggcatgcataaacggggcagtttttatgatatcgta
aacgtaggggagtgtcagatcgtagatgaagatttccgccgtgtgcttaagatcacattg
gaatattttaaggaaaaacagattccattttatcataaactccgtcacaccgggtacctc
cgtcattttcttgtgagaaaagcagcaaaaacaggagagattttagttgaccttgtgaca
actacacagatggaggaacttagtggggaaaatgaaagtgcattattagaaggctgggtg
aaaaaactttgtgaggaaaaatatgacggtgtgctaaaaggaatccttcatacaaaaaat
gacagcgttgccgatacgatcaaaaatgaggggacagatattttatttggacaggacttc
ttttatgaggaactgcttggtctgaagtttaagatcacaccattttcctttttccagaca
aattcccttggtgcagaagtactctatcagactgcacgtgaatttatcggggatgcgctc
gacgatgaggcgaatcagacagtatttgacctgtattccggaaccggaacaatcgcacag
atactttctccggttgcaaagaaagtgatcggtgtggagatcgtggaggaggctgttgtg
gctgcaagggagaatgcagctttaaacggacttaccaactgcgaatttatcgcgggagat
gtattaaaagtgatcgatacgatcggggaaaaaccggattatatcgtacttgatccgcca
agagacgggatccatccgaaagcacttgagaagatcatccgctataatgtgccgcagatg
gtttatatttcctgtaaaccgaccagtttagcgagagatcttgaggtgctgcaggcgaga
ggatataaggtgaagaaagtgcagtgcgtggatatgtttccttcgacaggaaatgtggag
actgtatgtttattgtccaaactccacgaagcgaagcatcatgtgaatgtgagactggac
atggacgagatggatttaacggcggctgagaggcgctaa
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