Roseburia intestinalis XB6B4: RO1_33120
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Entry
RO1_33120 CDS
T02597
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RO1_33120
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Gene cluster
GFIT
Motif
Pfam:
DUF4368
Resolvase
Recombinase
Zn_ribbon_recom
DUF6724
DUF3837
Motif
Other DBs
NCBI-ProteinID:
CBL13621
UniProt:
D4L1Y1
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Position
3298015..3299895
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AA seq
626 aa
AA seq
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MRNEKITPLYERLSRDDELQGESNSISNQKQMLEDFARRNGLPNPTHFTDDGISGTRFDR
PGFLAMMEEVEAGRVEAIVIKDMSRLGRDYLKVGQVMEVLRQRGVRLIAINDGVDSLKGD
DDFTPFRNIMNEFYARDTSRKIRSVFKAKGMSGKHLTGTVIYGYLWDEKREHWLVDEEAA
EVVRRIFSLTLEGYGPYQIACKLSADRIEIPVVHLARFNEGVNRSKPVKDPYGWGSSTIV
NILKKREYLGHTINFKTRKHFKDKKSHYVSEDEWTIFENTHEAIIDQQTFDLVQKIRSNV
RRYPNGWGEAAPLTGLLYCADCGGKMYVHRTNNGKRISQYTCSNYTKVPCGTLCLTQHRI
NESAVLTLVSDTLRAIAEYSRNDRTEFIHTVQETQVAQQSADISKKRRHLATAQKRAGEL
EKLICKIYEDNALGKLPDTRYKALDAQYAKEQDALEIEIAELEKAVTGYEQSQKSAEKFI
ALIDKYENFDTLTNTMLNEFVEKILVHERSRKGSQDTTQEIEIYFNFLGRYIPPSLQPVP
LTPEEQEELRKREERKDRLHQNYLKRKASGAQKRYEDKIKAKKKAEMDAKKALIRAEDMK
KGVFSTIGQLPKEEPRKGSIAASAAV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatgaaaaaattaccccactgtacgagcgcctgagccgggacgacgagttacag
ggcgagagcaattccatatccaaccaaaaacagatgttagaggattttgcccgccggaat
gggctgccaaaccctacgcactttacagatgatggtatctcaggcacccgttttgaccgc
cccggatttttggcgatgatggaggaagtggaggcagggcgtgtagaggcaatcgtcatc
aaggacatgagccggttggggcgcgactatctgaaggtcggtcaggtcatggaggttttg
cggcaacgcggtgttcgtctgatcgccatcaacgacggtgtggacagtctgaaaggcgat
gacgattttaccccattccgcaacatcatgaatgaattttacgcccgtgataccagcagg
aaaatccgttctgtgtttaaggcaaaaggtatgagcggcaagcacctgaccggcactgtg
atttacggctacttatgggacgaaaaacgggagcattggctggtagatgaggaagccgcc
gaagtggtacgccgtatcttctccctcacgctggagggatatgggccttatcagattgcc
tgcaaattatccgcagatcggattgaaattcccgtcgtacaccttgcccgcttcaacgag
ggtgtgaaccgttcaaagccggtcaaagacccctatggatggggatcatctaccatcgtg
aacattttgaaaaaacgagagtatttggggcacaccatcaatttcaagacccgcaagcac
tttaaggacaagaaaagccactatgtttctgaggacgagtggacgatctttgagaatacc
catgaagccattatcgaccagcagacctttgatctggtgcagaaaatccgcagcaatgta
cggcgttatccaaacggctggggcgaagcagctcccctcacaggcttactctattgtgcc
gattgtggcggcaagatgtatgtccaccgcaccaacaatggcaagcggatttctcaatat
acctgttccaattataccaaagttccgtgtgggacactatgccttacacaacaccgtatc
aatgagagtgctgttctgacattggtttccgacacactccgggctatcgctgaatattcg
agaaatgaccggacggaatttattcacactgttcaggagacgcaggttgctcaacagagt
gccgatatatcgaaaaagcgcaggcatctggctactgcccaaaagagagccggagaactg
gaaaaactgatttgcaaaatctatgaggataacgccctcggcaagctgccggatacacga
tataaggcgcttgatgcacagtatgccaaagagcaggacgcacttgagattgaaattgcg
gagttggaaaaggctgttaccggctatgagcagagccagaaatcagcagagaaatttata
gccctgattgataagtacgagaattttgacacgctgacaaataccatgctcaacgagttt
gtagagaaaatccttgtccatgaacgctcccgaaaaggcagtcaggataccacgcaggaa
attgaaatctactttaattttttaggacgctatattccaccatccttacagccggttcct
ttaaccccagaggaacaggaagaattgcggaaaagagaagaacgcaaggacaggctccat
cagaactatttgaagcggaaagccagcggcgcacagaaacggtatgaggacaaaatcaag
gcgaagaaaaaagcggaaatggacgctaagaaagccctgatccgggctgaggatatgaaa
aaaggtgttttttctactatcgggcagctaccaaaagaagaaccgcgcaaaggcagcata
gcagccagcgcagcagtctaa
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