Roseburia intestinalis XB6B4: RO1_33460
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Entry
RO1_33460 CDS
T02597
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RO1_33460
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Gene cluster
GFIT
Motif
Pfam:
Recombinase
DUF4368
Resolvase
Zn_ribbon_recom
Zn_ribbon_RPB9
DUF4407
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
CBL13646
UniProt:
D4L206
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Position
3320926..3322536
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AA seq
536 aa
AA seq
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MLRQTNQQPITALYPRLSHEDELQGESNSISNQKRILETYAKQNGFSNLRWYTDDGYSGA
NFQRPGFQAMLADIEAGKVGTVIVKDMSRLGRNYLQVGMYTEMIFPQKGVRFIAINDGVD
SAQGDNDFAPLRNIFNEWLVRDTSKKIKAVKRSKGMSGKPITSKPVYGYLMDEDENFIID
EEAAPVVKQIYNLCLAGNGPTKIARMLTEQQIPTPGTLEYRRTGSTRRYHPGYECKWATN
TVVHILENREYTGCLVNFKTEKPSYKVKHSVENPPEKQVIFENHHEPIIDTQTWERVQEL
RKQRKRPNRYDEVGLFSGILFCADCGSVMYQQRYQTDKRKQDCYICGNYKKRTHDCTTHF
IRTDLLTAGVLSNLRKVTSYAAKHEARFMKLLIEQNEDGGKRRNAAKKKELETAEKRIAE
LSAIFKRLYEDSVTGRISDERFTELSADYEAEQRELKERAAAIQAELSKAQEATVNAEKF
MNVVRRHTSFEELTPTLLREFVEKIVVHECSYDENKTRRQDIEIYYSFVGKVDLPE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgttaagacagaccaaccaacaaccaattaccgccctttacccaagactttcccatgag
gacgagctgcaaggcgagagcaattccatttccaaccagaagcgtattcttgaaacctat
gcaaagcagaacggcttttccaatctgcgctggtacacggacgacggttattctggtgcg
aactttcaaagacccggttttcaagccatgcttgcggacattgaagccggaaaagtcggg
acagttatcgtaaaggatatgtcgaggttagggcgaaactacctgcaagtgggaatgtac
acggaaatgattttcccacagaaaggtgtccgctttatcgctatcaatgacggagtggac
agcgcacaaggcgacaatgactttgccccgctgcggaatatctttaacgaatggctggtg
agagatacgagcaagaaaatcaaagcagtaaaacgctcaaaaggcatgagtggcaagccc
atcacaagcaagcctgtgtatggctacctcatggacgaggacgaaaatttcattattgac
gaggaagctgcacccgtagtcaagcagatatacaacctctgccttgccgggaacggtccg
actaagatagcccgtatgctcacagagcagcaaatccccacgccggggacgctggaatac
cgtaggacgggcagcacccgccgctaccaccccggctatgagtgcaagtgggcgaccaat
accgttgtgcatatccttgaaaaccgggaatacacaggctgtctggtaaatttcaagaca
gaaaagccctcttacaaagtcaagcacagcgtagaaaatcccccggagaagcaagtgatt
ttcgagaaccaccacgagcctatcatagacacccagacatgggaacgggtgcaggaactt
cgcaagcagcgcaaacgccccaaccgctatgatgaagtgggcttgttctccggcatactg
ttctgtgcggactgcggcagcgtcatgtaccagcagcgataccagacggacaagcgcaag
caggactgttatatctgcggcaactacaagaaacgcacccatgactgtacgacgcacttt
atccgcaccgacctcttgaccgctggtgtactctccaatctgcggaaagtgacaagctat
gcggcaaagcatgaagcccggtttatgaagctcttaattgagcagaacgaggacgggggc
aagcgcaggaacgccgctaagaaaaaggaactggaaaccgccgagaaacgcatagccgag
ttatccgctatcttcaaacggctgtatgaggacagcgtgaccgggcgcatatcagacgag
cgtttcacagagctgtcggcagactatgaagcagaacaacgggagctgaaagaaagagcc
gctgctatccaagcggagctttccaaagcacaggaagccaccgtgaacgcagaaaagttt
atgaatgttgtccggcggcataccagctttgaagaacttacccctactctgctgcgggag
tttgtagagaaaatcgttgtgcatgagtgcagctatgacgagaacaagacccgcagacag
gacattgagatttattattcttttgttggcaaggtggacttgcccgaataa
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