Roseburia intestinalis XB6B4: RO1_34580
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Entry
RO1_34580 CDS
T02597
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RO1_34580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_34580
Enzymes [BR:
rix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RO1_34580
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RO1_34580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
nSTAND3
PIF1
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
NPHP3_N
NTPase_1
T2SSE
AAA_28
RsgA_GTPase
HerA_C
AAA_16
AAA
SLFN-g3_helicase
Sacchrp_dh_NADP
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CBL13740
UniProt:
D4L2A0
LinkDB
All DBs
Position
3423696..3425909
Genome browser
AA seq
737 aa
AA seq
DB search
MEKTVESLAGYVEHIIYRNADNGYTVLNLVSGEDEITCVGIFSAIAEGENIEAQGEYTEH
PTYGQQFKVTSFEEKAPEDEEAIERYLGSGAIKGIGLAMAARIVRRFKEDTFRIIEEEPE
RLAEIKGISNRKAMEIASQVNEKRDLRQAMIFLQQYGITMNLAVKVYQAYGQDVYGIIRE
NPYRLADDIDGVGFRTADEIAARVGIRMDSDFRVRSGILYTLLQASGEGHTYLPETELTP
RASKLLNVTAEQVEKQYMDLAIERKIILKQMEDQTQIYAASFYYMEANTATMLKRLNVSY
DVSDAEIEQQIRGIEKKSGMTLDEHQVTAVKEAVRNGLLVITGGPGTGKTTTINTIIRYF
ELEGLEIFLAAPTGRAAKRMSETTGFEARTVHRMLELNGGAEGSGGFERDESNPLEADVI
IVDEMSMVDISLMYSLLKAISVGTRLILVGDVNQLPSVGPGSVLRDIIQSHACNVVMLTK
IFRQASTSDIIVNAHKINHGEEVILDNKSMDFFFLKRYDADVIINVVLQLIKQKLPKFVD
ATPYDIQVLTPMRKGLLGVERLNGILQRYMNPPANDKVEKEYGSTVFREGDKVMQTKNNY
QLAWEIRTKFGLTVDKGLGIFNGDMGIIRQINDFAEQMIIEFDEGRMVEYPYKLLDELEL
AYAITIHKSQGSEYPAVVIPLLGGPMMLMNRNLLYTAVTRARKCVTLVGNEVTFQQMIQN
TSQQKRYSGLCDRLKEK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacagtggaaagtcttgcaggatatgtggaacacattatatatcggaatgcg
gataatggatataccgtgttaaatctggtgagcggggaggatgaaatcacctgtgtgggg
atattttcggcaatcgcagagggagaaaatattgaggcacagggggagtacacggaacat
ccgacctatgggcagcagtttaaagtaacaagttttgaggagaaagcacctgaagatgag
gaggcaatagagcggtatcttggttccggtgcaatcaagggaatcgggcttgccatggcg
gcaagaattgtcaggcgttttaaggaggataccttccggatcatagaggaagaaccggaa
cgtctcgctgagatcaaagggatcagtaaccgcaaagcgatggagattgccagccaggtc
aacgaaaagagggatctacggcaggcgatgatctttttgcagcagtatggaatcacgatg
aatttagcggtcaaggtatatcaggcatacggacaggatgtttatggtatcatccgggaa
aatccgtaccggctggcggacgatattgatggagtcggattccggacggcggatgagatc
gcggcgcgggttggtatccggatggactctgatttccgtgtgcgaagcggaatcctgtat
acactgcttcaggcaagtggggagggacatacctatctgccggagacagagctgacaccg
cgtgcatcaaaattattgaatgttacggcagaacaggtggaaaaacagtacatggatctt
gccattgaaaggaagatcatattaaaacagatggaagatcagacacagatctatgcagcg
tcattttattatatggaagcaaacacggcgacaatgttaaaacggctcaatgtaagttat
gatgtgtcagatgcggagattgaacagcaaatccgggggatcgaaaagaaaagcggcatg
acgttggatgaacatcaggtaacggcggtcaaagaggcagtgcggaatggtctgcttgtg
atcacgggagggcctggaaccggaaagacgaccacgattaatacgatcatccgctatttt
gaactggagggcttggaaatctttttggcagctccgacagggcgtgcagcaaagcgcatg
agtgagacaacgggatttgaggcgcggacagttcaccgtatgttagagctgaatggggga
gccgagggaagcggtggatttgaaagggatgaaagtaatccactcgaagcggatgtgatc
attgtagatgagatgtcgatggtggatatctcactgatgtattctctgctcaaagcaatc
tctgttggaacgaggctgattcttgtcggggatgtcaatcagcttccgagtgtcggaccg
ggaagtgtactccgtgatattatccaatcacatgcctgcaatgtagttatgctgaccaaa
atcttccgtcaggcatccaccagtgatattattgtcaatgcgcataagatcaatcatgga
gaagaagtgatattagataataagagcatggatttctttttcctgaaacggtatgacgca
gatgtgatcatcaatgtggtgctgcagctcattaagcagaaactgccgaagtttgtggat
gcgacgccttatgatatccaggtactgacaccaatgcgcaagggactgcttggcgtagag
cgcctgaatgggattttgcagcgatatatgaatccgcctgccaatgataaagtggagaaa
gaatatggcagcactgtgttccgtgagggggataaagttatgcagacaaagaataactac
cagctcgcgtgggaaatccgtacaaaatttggactcactgtggataaaggccttggaatt
ttcaatggagatatgggaatcataagacagatcaatgatttcgcagagcagatgatcata
gagtttgatgaagggagaatggtagagtacccctataaacttctggatgaacttgagctt
gcctatgcgatcacgatccataaatcacagggaagcgagtatccggcggtcgtcattccg
ctgcttggaggtccgatgatgttaatgaaccggaatctattgtatactgccgtcacgcgt
gcaagaaaatgtgtgacgttagtcggcaatgaagtgaccttccagcagatgatccagaat
acctcacagcagaaaaggtacagcggactctgcgaccgtttaaaagaaaaataa
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