Roseburia intestinalis XB6B4: RO1_36940
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Entry
RO1_36940 CDS
T02597
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rix03009
]
RO1_36940
Enzymes [BR:
rix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RO1_36940
Ribosome biogenesis [BR:
rix03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RO1_36940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5627
CandA_N
Motif
Other DBs
NCBI-ProteinID:
CBL13941
UniProt:
D4L2V1
LinkDB
All DBs
Position
3660065..3660730
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AA seq
221 aa
AA seq
DB search
MRNSMQPAIIYEDEDIIVCKKPAGVATQTRRIGQADMESLLKNYRASKGELPYIGVVHRL
DQPVEGVMVFAKNKEAAADLSRQIKTKLADKYYYAMTDGVPEKKKGTLEDELLQNGKTNA
SEVVERGTPQAKHASLSYEVVEQDGKHAVLRIKLDTGRHHQIRVQLAHAGMPIVGDKKYN
FKENIAPSGGQLALCSFKIAFRHPKTHRKLEFEIDKPFGLS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacagtatgcagccagcgatcatttatgaagatgaagacattatcgtctgtaaa
aaaccggcaggcgtggcgacacagaccagacgcatcgggcaggcggacatggagagcctg
ctaaaaaattaccgtgcatccaaaggggagcttccttatattggtgtggtacatcggtta
gaccagccggtggaaggcgttatggtgtttgcaaaaaataaagaagcagcggcagatcta
agccgccagatcaaaacaaaactggcggacaaatattattatgcgatgacggacggcgtg
ccggaaaagaaaaaaggaaccttagaggatgaacttttacagaatggaaagacaaatgcc
tccgaggtggtggaaagaggaacaccgcaggcaaaacatgccagcctttcctatgaggtg
gtcgagcaggatggaaaacatgccgttttgcgtatcaaacttgataccggacgccaccat
cagatccgggtgcagcttgcacatgcagggatgccgatcgttggggataaaaagtacaac
ttcaaagaaaacattgcaccgtcgggcggacagcttgcactgtgctcttttaagatcgcg
ttccggcatccgaaaacgcatagaaaactggagtttgaaattgacaagccttttggttta
tcataa
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