Roseburia intestinalis XB6B4: RO1_37020
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Entry
RO1_37020 CDS
T02597
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rix03032
]
RO1_37020
03036 Chromosome and associated proteins [BR:
rix03036
]
RO1_37020
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_37020
DNA replication proteins [BR:
rix03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RO1_37020
Chromosome and associated proteins [BR:
rix03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RO1_37020
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RO1_37020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
TFIIB
Motif
Other DBs
NCBI-ProteinID:
CBL13949
UniProt:
D4L2V9
LinkDB
All DBs
Position
3671731..3672006
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAELVAAMAEKTELSKKDAEAALKAFTDVVAEELKKGEKIQLVGFGTFEVSERAERTG
RNPQSGKEMVIPASKAPKFKAGKALKDMVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagaattagttgcagcaatggctgagaaaactgaattaagcaaaaaagac
gcagaagcagcattaaaagctttcacagacgttgtagctgaagaattaaaaaaaggtgag
aagatccagttagttggattcggaacattcgaagtatctgagagagcagaaagaacagga
agaaacccacagagcggtaaagagatggttattccggcttctaaagctccaaaattcaaa
gctggtaaagctttaaaagatatggttaacgcataa
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