Roseburia intestinalis XB6B4: RO1_37390
Help
Entry
RO1_37390 CDS
T02597
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03030
DNA replication
rix03430
Mismatch repair
rix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RO1_37390
03430 Mismatch repair
RO1_37390
03440 Homologous recombination
RO1_37390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rix03032
]
RO1_37390
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_37390
Enzymes [BR:
rix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RO1_37390
DNA replication proteins [BR:
rix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RO1_37390
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RO1_37390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
EcoR124_C
Motif
Other DBs
NCBI-ProteinID:
CBL13978
UniProt:
D4L2Y8
LinkDB
All DBs
Position
3713171..3713878
Genome browser
AA seq
235 aa
AA seq
DB search
MQDYVVIDLEMTGLNAKTDHILEVGAVRVRNHQAVDKFGAILCQNVKIPEKVTELTGITE
AMVQGGMEKEEAMRQFFEFIGEDIIVGQNVIFDYGFLKQWAVNHNMPLERNAVDTLKLAR
KFLPKEQKKDLESLCACFGVKRENAHRAFDDAYETWQVYEALRERYEEESAGDFMPKPLL
YKAKKQTPATVRQIKYLREYAAHYQIKLPENFPEMTRSEASRLTDRLIATYGKMP
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattatgtagtcattgatcttgaaatgacaggtctgaatgcaaagaccgatcat
attttagaagtaggggcagtcagagtccggaaccatcaggcggtggataaatttggtgca
attttatgccagaacgtaaagataccggaaaaagtgactgaacttaccgggatcacggag
gcgatggtgcagggcggcatggaaaaagaagaggcaatgcggcagttctttgaatttatc
ggagaggatatcatcgttgggcagaatgtgattttcgattatggatttttaaagcagtgg
gcggtaaatcataatatgccattggaacggaatgcggttgataccttaaaacttgcaagg
aaatttttgccgaaagagcagaaaaaggatctggaaagcctgtgtgcctgctttggggta
aaaagagaaaatgcccatcgtgcatttgacgatgcatatgaaacatggcaggtttacgag
gcactcagggaacgatacgaggaggaatctgccggagatttcatgccaaagccgcttctt
tataaggcgaaaaaacagacgccggcaacggtacggcagataaaatacttaagagaatat
gcggcgcattatcagatcaaactgccggaaaatttcccggagatgacaaggagcgaggca
tcaagactgacggaccggctgatcgccacctatgggaaaatgccataa
DBGET
integrated database retrieval system
