Roseburia intestinalis XB6B4: RO1_38270
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Entry
RO1_38270 CDS
T02597
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rix03000
]
RO1_38270
Transcription factors [BR:
rix03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RO1_38270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_23
HTH_3
HTH_Tnp_ISL3
HTH_24
Sigma70_r4_2
HTH_38
MerR
HTH_36
HTH_10
TetR_N
Sigma70_r4
MarR_2
HTH_7
HTH_28
PGM1_C
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CBL14052
UniProt:
D4L362
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All DBs
Position
3803464..3804501
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AA seq
345 aa
AA seq
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MATIKEIAKACGVSVATVSNILNKKPGASEATRNLVLKTAKEMNYMPNYVAKNLKARNTR
SIGVIAEDMTIFSIPDIIDGITEYCEKVKYQILLTNLRLYKKYNDYYYHRTDYYGLVDEE
IRKLIATQVDGIIYVTAHERIMHCIPDNLSIPAVMAYGYTESKNIPSVVVDDERGAYEMI
RYLIAQGHKKIGVITGKADSLHAQARLIGYQKALRDEGLLYDPELIYYGDWGRESGHTGA
EVLLKKQVTAIFCMNDLMAGGCYDWADESGIKIPQEISVAGYDNRELSSYYKPPLSTTEL
PLHDIGYRAAEVMIGLVEKKSGETAEPQVYKVPCKQLIRQSIKTL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatcaaagaaatcgcaaaagcctgcggtgtgtcggtagctaccgtttcgaat
atcctgaataaaaagccgggggcaagcgaagcgacaagaaatcttgtgttaaaaactgca
aaagaaatgaattatatgccaaactatgtggcaaaaaatcttaaggcacgcaataccaga
agtatcggagtcattgcagaggatatgacgatattcagtattccggatattattgacggt
attacggaatattgtgaaaaggtaaaataccagattcttctgaccaatttaagattgtat
aaaaaatataatgactattattatcacagaacagattattatgggctggtggacgaggag
atcaggaaactgatcgcaacgcaggtggacggtatcatttatgtgacggcacatgagcgt
atcatgcactgtatcccggataatttaagtattcctgccgtgatggcatatggttatacg
gagagtaaaaacatcccgtccgtagttgtggatgacgagcgtggtgcatacgagatgatc
cgttatctgatcgcacagggacataaaaaaatcggagtgatcaccggaaaagcagacagc
cttcatgcgcaggcacgtctgatcggatatcagaaggcattgcgggatgaggggctttta
tatgatccggaactgatctactatggagactggggaagagaatccggacataccggagca
gaagtgcttttaaaaaaacaggtgacggcaatattctgcatgaatgatcttatggcaggc
ggatgttatgactgggcagatgagtcggggataaagataccacaggagatatctgttgcg
ggatacgataacagagaactgtcaagctattataagccgccgctctccacgacggagctg
ccacttcatgatatcggttacagggctgccgaggttatgatcggcctggtggagaaaaag
tcaggcgagacggcagaaccgcaggtctataaagttccatgtaagcagctgatccgccag
tcgatcaaaacattataa
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