Roseburia intestinalis XB6B4: RO1_38340
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Entry
RO1_38340 CDS
T02597
Name
(GenBank) Alpha-L-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00520
Amino sugar and nucleotide sugar metabolism
rix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RO1_38340
Enzymes [BR:
rix01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
RO1_38340
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Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_39
GH-E
Motif
Other DBs
NCBI-ProteinID:
CBL14059
UniProt:
D4L369
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All DBs
Position
3810330..3811826
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AA seq
498 aa
AA seq
DB search
MVLDKEFQIAPIDKRIYGSFIEHLGRAVYEGIYQPGHPSADEDGFRKDVMELVKELDVPI
IRYPGGNFVSNFFWEDSVGPVEERPHRLELAWRSLEKNEIGLNEFSKWAKKVNSDVMMAV
NLGTRGIADACNLLEYCNHPSGTKYSDLRIKHGVKDPHNIKVWCLGNEMDGPWQIGHKTM
EEYGRLAEETAKAMRLIDPDIELVSCGSSNLDMPTFPDWEAVTLSHTYDYVDYISMHQYY
GNRDNDSNDFLAQSDDMDTFIRTVIATCDYVKAKKRSKKVMNLSFDEWNVWFHSNAADDD
ITENHPWQVAPPMLEDIYNFEDSLLVGLMLITLMKHADRVKMACLAQLVNVIAPIMTDAA
GGAWKQTIFYPFMHASKYGRGIALQPVISSSRHATAKHDEITDVESVAVYNEEKDEVTIF
AVNRNLEEDVELTTDVRSFAGYRIKEHIVMENDDLKAANTLTEQNVYPVNADDRSKLDDG
VVTSVLKKASWNVIRLGK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtactggataaagaatttcagatcgctccgatcgataaaagaatttacggttctttt
atcgaacaccttggaagagcggtatatgaaggaatttatcagccgggacatccgtcggca
gatgaggatggattccgcaaagatgtgatggagctggtaaaggagctggatgtgccgatc
atccgttatccgggcggcaactttgtatcaaactttttctgggaggactctgtgggaccg
gttgaggagcgtccgcaccgtctggaacttgcatggagaagtttagagaaaaatgagatc
ggtttaaatgaattttccaaatgggcaaagaaagtcaattctgatgtcatgatggcagtg
aaccttggaacgcgcggtattgcagatgcctgcaatctgctggagtactgcaatcatccg
tcaggaacgaaatacagtgatcttcgtatcaaacatggtgtgaaagatccgcacaacatc
aaggtgtggtgccttggaaacgagatggacggaccgtggcagatcggtcacaagacgatg
gaggagtacggaagacttgcggaggagaccgcaaaggcaatgcgcctgatcgatccggac
attgagctggtatcctgcggaagctccaacctggatatgcctacgttcccggactgggag
gctgtcacattgagccatacttatgattatgtcgactatatctccatgcatcagtattat
ggcaaccgcgacaatgacagcaatgatttccttgcacagtccgatgatatggatacgttt
atccgcacagtcattgcgacctgtgattatgtcaaagcgaaaaaacgcagcaaaaaagtc
atgaatttaagttttgatgaatggaatgtatggtttcactcaaacgctgcggatgatgat
attaccgagaaccatccatggcaggtggcacctccgatgttagaggatatctataacttt
gaggattccctgttagtcggactgatgctgatcacactgatgaaacatgcagaccgtgtc
aagatggcatgtctggcacagcttgtcaatgtaatcgcaccgatcatgacagatgcggca
ggcggagcatggaaacagacgatcttttatccgttcatgcatgcatccaaatacggcagg
ggcatcgcattgcagccggtaatctcaagctccagacatgcaacggcaaaacatgatgag
atcacggacgtggaatctgtggctgtctataacgaagaaaaagacgaagtcacgatcttt
gcagtaaaccgtaacctggaagaggatgtagagcttaccaccgatgtgcgtagttttgcg
ggataccggatcaaagagcatatcgtgatggaaaacgatgacttaaaagcagccaacacg
ctgaccgaacagaatgtatatccggttaacgcagatgacagaagtaaacttgatgacggt
gttgtcacaagcgtgttaaagaaagcatcctggaatgtgatccgtcttggaaaatag
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