Roseburia intestinalis XB6B4: RO1_38500
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Entry
RO1_38500 CDS
T02597
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RO1_38500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rix02000
]
RO1_38500
Transporters [BR:
rix02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RO1_38500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
DcuC
CitMHS
3HCDH_N
DUF2244
Motif
Other DBs
NCBI-ProteinID:
CBL14074
UniProt:
D4L384
LinkDB
All DBs
Position
3826242..3827531
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AA seq
429 aa
AA seq
DB search
MSAVVVFIIFAICLIIAIPISISLGIVAVLPGAFDASFTASAGYVIRSMVGGIDSFPLLA
VPMFVLAGILMEHGKISEKLFDVFVYFLGNKRAGIPCAVIITCLFYGAISGSAPATVAAV
GSMTIPLLIELGYEKDFSTAIVAVAGGLGVIIPPSIPFIMYAMATGESVSDLFLAGIVPG
MMISALLIFYAYYYCRRHGEDREKIQAKMDQLKTKGFVNILKESIWALLSPVIVLGCIYS
GVASPTEAAVISVFYSLFVSLFIYKSIKVKQIWGIMVEAMKTYAPILFILATSTAFSRVL
TLMQVPQDVSAWIMTHFSNEIVLLLVINVVLLIVGMVMDTTPAILILSPILLPIVEHVGM
NPIHFGVMMIVNLAVGFVTPPVGVNLFVASSLTNVPMMQIAKKAMTMIGYFMLALLLITF
IPAISLCLL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagttgttgtttttattatttttgccatatgtcttatcattgcaattccgatc
tctatttcacttggaattgtagctgtactgccgggagcatttgatgcttcttttacggca
agtgccggatatgtcatccgttccatggtcggaggaattgacagtttcccgttacttgca
gtgccgatgtttgtgcttgcgggaatcctcatggaacacggcaagatttcagaaaaatta
tttgatgtatttgtatatttccttggaaacaaaagagcgggaataccatgtgcagtgatc
attacctgtctgttttatggagcaatttcaggttctgcaccggcgaccgttgctgcggtc
ggaagtatgacgattccgcttttgatcgaacttggctatgaaaaagatttttccacggcg
atcgttgcggtggcgggcggtcttggcgttatcatcccgccgagtatcccgtttatcatg
tatgcgatggcgaccggtgaatcagtcagtgacctgtttttggcaggtatcgtaccgggc
atgatgatcagtgcactgctgatcttttacgcatattattactgccgccgtcacggtgag
gacagagagaagatccaggcgaaaatggatcagctcaaaacaaaaggattcgttaacatt
ttaaaagagagtatctgggcgctcttaagccccgtgatcgtgcttggctgtatttattcc
ggtgtggcatccccgacggaggcggctgtcatctccgtattttactccctgtttgtcagt
ctgtttatttacaaatctattaaagtaaaacagatctggggcattatggtggaggcgatg
aaaacctatgcaccgatcttatttatccttgcaacatcaaccgcgttttcgcgtgtgctc
acgctgatgcaggtaccgcaggatgtcagtgcatggatcatgacacatttctccaatgag
atcgtactgcttcttgtcatcaacgtggtacttctgattgttggtatggtcatggatacg
accccggcgattctgatcttaagtccgatcttactgccgatcgtggaacatgtcggaatg
aatccaatccatttcggtgtcatgatgatcgtaaaccttgcggttggatttgtcacacct
ccggtcggcgtcaacctgtttgtggcaagttcgcttaccaatgtgccgatgatgcagatc
gcaaagaaggcaatgacgatgatcggatatttcatgcttgcactgcttctgatcacattt
attccggcaatcagtctctgtctgctttaa
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