Roseburia intestinalis XB6B4: RO1_38780
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Entry
RO1_38780 CDS
T02597
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rix03016
]
RO1_38780
Enzymes [BR:
rix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
RO1_38780
Transfer RNA biogenesis [BR:
rix03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RO1_38780
Prokaryotic type
RO1_38780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
AviRa
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
CBL14100
UniProt:
D4L3B0
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All DBs
Position
3846480..3847556
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AA seq
358 aa
AA seq
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MKGVKSMPGMLGIAHQMANFTKQNCILLRKTRSKILSSPVGSDFAPQNKEDYMLDVCLLG
TAGMMPLPHRWLTASLMRYNGSSLLIDCGEGTQIAIKEKGWTFKPIDVICFTHYHADHIS
GLPGLLLSMGNAERTEPLTMIGPKGLERVVGALRMIAPELPFEIRYIEIMEPEADIEING
YHIHAFRVNHNITCYGYTVEIRRAGRFSVEHAKEREIPQKYWNRLQKGEEIETEDGAHYT
PDMVLGAARKGIKVTYCTDTRPTESLVASAKNSDLLICEGMYAEKEKIAKAKQYKHMTFY
EAAEVAKKAEVAEMWLTHFSPSLVHAEDYMPQVREIFPNAFLGKDGKSVELMFEDEKN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagtaaaatctatgcccggtatgctgggcattgctcaccagatggcaaatttt
acaaaacaaaattgcattttgctccgcaaaacaaggagtaaaatcctctcctcgccagtg
ggctcggattttgctccgcaaaacaaggaggattatatgttagacgtatgtcttttggga
actgcaggcatgatgccgctgccgcaccgttggctgacggcgtcactgatgcgttataac
gggagcagtttacttattgactgtggagagggaacccagatcgcaatcaaggaaaaagga
tggacttttaagccaatcgatgtgatctgttttacacattatcatgcggatcatatcagc
ggactgccgggattgcttctttccatgggcaatgcagagcggacagaacctctgactatg
attggaccaaagggattagagcgtgtagtcggggcacttcggatgattgcaccggaactg
ccgtttgaaataagatatattgaaataatggaaccggaagccgatatagaaataaacgga
tatcatatccatgcgttccgcgtcaaccataatattacctgctatgggtataccgtggag
atcagacgtgccggaaggttttccgtggagcacgcgaaggaacgtgaaattccacaaaaa
tactggaacagacttcaaaaaggggaagagatcgaaacggaagatggggcacattatacc
ccggatatggtgcttggtgctgcccggaaagggatcaaagtaacttactgtaccgatacc
aggccgacggaatcacttgttgcttctgcaaaaaattcggatcttctgatctgcgagggt
atgtatgcggaaaaagaaaaaattgcaaaagcaaaacagtacaagcatatgactttttat
gaagcagcggaagtggcaaaaaaagcggaagtcgcagaaatgtggctgacccatttttca
ccgtcactggtgcatgcagaagattatatgccgcaggtaagggagattttccccaatgct
tttcttggaaaagatggaaagagtgtggaactgatgtttgaggatgagaaaaattga
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