Roseburia intestinalis XB6B4: RO1_39150
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Entry
RO1_39150 CDS
T02597
Name
(GenBank) transcriptional regulator, GntR family
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rix03000
]
RO1_39150
Transcription factors [BR:
rix03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RO1_39150
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_11
HTH_41
HTH_DeoR
Rrf2
RPA_C
HTH_Crp_2
TrmB
STN1_2
Motif
Other DBs
NCBI-ProteinID:
CBL14131
UniProt:
D4L3E1
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All DBs
Position
3878192..3879295
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AA seq
367 aa
AA seq
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MDKKLKYYDLMEDLRKQIVSGKIKPGEKLPSENELSGTYQVSRQTVRKALQILQNEGYIY
AEHGRGTFCSEMARRTGETKNIAVVTTYLSDYIFPRVIQGIDKVLTENGYSILLKNTRNS
RNMEAKCLEELLQKGIDGLIIEPSKSQIFCKHINLYQTLDEYRIPYVFIQGSYAQLAEKP
HILLDDCLGGYLVTRYLISLGHHHIIGIFKADDTQGQQRHKGYVQALQEAGIAYDPDKVV
WFYTEDRKTHPYEQMCHMAKMRCEHFFDSVVSYNDQIALEVIRALEDEGLKVPDDVSVTG
YDDSYLASSGKVPLTTVAHPQEKLGEMAAELLLGLLKEGNIPESERQILVKPELVIRESC
RSRKKEE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagttaaaatattatgatctgatggaggacttaagaaaacagatcgtttca
ggaaaaataaagccgggagaaaaactgccatcggaaaatgaactttccgggacatatcag
gtaagcagacagactgtacggaaagctctgcagattcttcagaacgagggatatatttat
gcggaacatggacgtggaacgttttgttcggagatggcgagacgcacgggtgaaacaaaa
aatatagcagtggtcacgacatatctgtctgattatattttcccgagagtgatccaggga
attgataaagtccttacggaaaatggatatagtattcttttaaagaatacaagaaattcc
agaaatatggaagcaaaatgtttagaagaattattgcagaagggaattgatgggctgatc
atagaaccaagcaaaagtcagatcttctgcaaacatattaatttataccagacgctggat
gaatatcggattccatatgtatttattcagggcagttatgcgcagcttgcagaaaagccc
catatccttttagatgactgccttggaggatatctggttacaagatatctgatctcactg
gggcaccatcacatcatagggatatttaaagcggatgatacgcagggacagcagcggcac
aaagggtatgtgcaggctttacaggaagcagggattgcgtatgacccggataaagtggta
tggttttatacggaagaccggaaaacgcatccatatgaacagatgtgtcatatggctaag
atgagatgtgagcatttctttgacagtgtggtatcgtataatgaccagattgcactagag
gtcatccgggcattagaggatgaaggacttaaagtgccggatgatgtttcagtgacagga
tatgatgattcctatcttgcgtcaagtggaaaagtgccgcttaccacggtggcgcatccg
caggaaaaattaggtgaaatggctgcagaacttcttcttggactgctgaaagagggaaac
atcccggagtcagaaagacagatccttgtaaagccggagttagtgatccgggaatcctgc
agatcccggaaaaaggaggaataa
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